Wednesday, September 18, 2019

Table of Contents Alert: The EMBO Journal, Vol. 38, No. 18, 16 September 2019

Cancer - metabolism, microenvironment and models (2019)
Cover Image The EMBO Journal
Volume 38, Issue 18

16 September 2019


Editorial

Self‐correction prevents withdrawal syndrome
Erica Wilfong Boxheimer, Bernd Pulverer

e70001 | First Published: 30 August 2019

EMBO Press has enhanced the toolkit for corrections to research papers by including 'withdrawal' and 'partial retraction'. The aim is to encourage self‐correction.

News & Views

Photoreceptor signaling: when COP1 meets VPs
Qin Wang, Chentao Lin

e102962 | First Published: 21 August 2019

A new study reveals a unified mechanism of transcription factor activation by structurally diverse photoreceptors during plant photomorphogenesis.

Review

DNA damage kinase signaling: checkpoint and repair at 30 years
Michael Charles Lanz, Diego Dibitetto, Marcus Bustamante Smolka

e101801 | First Published: 08 August 2019

Smolka et al revisit the seminal Hartwell & Weinert concept of cell‐cycle ordering by checkpoint controls, particularly summarizing our current understanding of kinase networks and their direct roles in damage responses and DNA repair.

Articles

Open Access
Plant photoreceptors and their signaling components compete for COP1 binding via VP peptide motifs
Kelvin Lau, Roman Podolec, Richard Chappuis, Roman Ulm, Michael Hothorn

e102140 | First Published: 15 July 2019

Light activation increases affinity of various photoreceptors for the E3 ligase COP1, resulting in protection of light‐regulated transcription factors from COP1‐mediated degradation.

Open Access
Molecular pathways of senescence regulate placental structure and function
Hilah Gal, Marina Lysenko, Sima Stroganov, Ezra Vadai, Sameh A Youssef, Keren Tzadikevitch‐Geffen, Ron Rotkopf, Tal Biron‐Shental, Alain de Bruin, Michal Neeman, Valery Krizhanovsky

e100849 | First Published: 19 August 2019

Compromised cellular senescence in the multinucleated syncytiotrophoblast layer is associated with pathophysiology of intrauterine growth restriction during pregnancy in mice and humans.

Open Access
Hyperoxidation of mitochondrial peroxiredoxin limits H2O2‐induced cell death in yeast
Gaetano Calabrese, Esra Peker, Prince Saforo Amponsah, Michaela Nicole Hoehne, Trine Riemer, Marie Mai, Gerd Patrick Bienert, Marcel Deponte, Bruce Morgan, Jan Riemer

e101552 | First Published: 07 August 2019

H2O2‐mediated oxidation of the mitochondrial glutathione pool by peroxiredoxin Prx1 is a key determinant of peroxide‐induced cell death in yeast.

Interplay between the bacterial protein deacetylase CobB and the second messenger c‐di‐GMP
Zhaowei Xu, Hainan Zhang, Xingrun Zhang, Hewei Jiang, Chengxi Liu, Fanlin Wu, Lili Qian, Bingbing Hao, Daniel M Czajkowsky, Shujuan Guo, Zhijing Xu, Lijun Bi, Shihua Wang, Haitao Li, Minjia Tan, Wei Yan, Lei Feng, Jingli Hou, Sheng‐ce Tao

e100948 | First Published: 16 August 2019

A negative feedback loop between c‐di‐GMP production and the Escherichia coli Sir2‐family deacetylase CobB modulates biogenesis of acetyl‐CoA.

Open Access
Diverse roles of TssA‐like proteins in the assembly of bacterial type VI secretion systems
Johannes Paul Schneider, Sergey Nazarov, Ricardo Adaixo, Martina Liuzzo, Peter David Ringel, Henning Stahlberg, Marek Basler

e100825 | First Published: 12 August 2019

Comparative analysis of TssA/TagA subunits of the Type VI secretion system reveals three functional classes with distinct roles in sheath dynamics.

TRAF3IP3 mediates the recruitment of TRAF3 to MAVS for antiviral innate immunity
Wenting Zhu, Jiaxin Li, Rui Zhang, Yixiang Cai, Changwan Wang, Shishi Qi, She Chen, Xiaozhen Liang, Nan Qi, Fajian Hou

e102075 | First Published: 07 August 2019

The TRAF3 interacting protein 3, TRAF3IP3, promotes RIG‐I‐MAVS signaling to stimulate type I interferon production and protection against RNA virus infection.

C/EBPα mediates the growth inhibitory effect of progestins on breast cancer cells
A Silvina Nacht, Roberto Ferrari, Roser Zaurin, Valentina Scabia, José Carbonell‐Caballero, Francois Le Dily, Javier Quilez, Alexandra Leopoldi, Cathrin Brisken, Miguel Beato, Guillermo P Vicent

e101426 | First Published: 02 August 2019

C/EBPα acts as a tumor suppressor in hormone‐dependent breast cancer by facilitating chromatin accessibility and progesterone receptor loading at key cell cycle genes.

Resources

Open Access
The interactome of KRAB zinc finger proteins reveals the evolutionary history of their functional diversification
Pierre‐Yves Helleboid, Moritz Heusel, Julien Duc, Cécile Piot, Christian W Thorball, Andrea Coluccio, Julien Pontis, Michaël Imbeault, Priscilla Turelli, Ruedi Aebersold, Didier Trono

e101220 | First Published: 12 August 2019

Comprehensive interaction mapping of the KRAB domain zinc finger transcription factor family shows conservation of their function in KAP1 binding and identifies novel binding partners of the most ancient members.

A single‐cell transcriptome atlas of the adult human retina
Samuel W Lukowski, Camden Y Lo, Alexei A Sharov, Quan Nguyen, Lyujie Fang, Sandy SC Hung, Ling Zhu, Ting Zhang, Ulrike Grünert, Tu Nguyen, Anne Senabouth, Jafar S Jabbari, Emily Welby, Jane C Sowden, Hayley S Waugh, Adrienne Mackey, Graeme Pollock, Trevor D Lamb, Peng‐Yuan Wang, Alex W Hewitt, Mark C Gillies, Joseph E Powell, Raymond CB Wong

e100811 | First Published: 22 August 2019

A comprehensive analysis of the human retinal transcriptome at a single‐cell level defines gene expression profiles of all major retinal cell types.

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