Scientific Reports Biology Table of Contents e-alert: 09 October 2018

09 October 2018       •Visit Scientific Reports •Submit your manuscript to Scientific Reports     Welcome to your Table of Contents e-alert for Scientific Reports           Biological Sciences               Empagliflozin Ammeliorates High Glucose Induced-Cardiac Dysfuntion in Human iPSC-Derived Cardiomyocytes ▶     Kwong-Man Ng, Yee-Man Lau, Vidhu Dhandhania et al.             Genome-wide methylation analysis identifies ELOVL5 as an epigenetic biomarker for the risk of type 2 diabetes mellitus ▶     Joo-Yeon Hwang, Hyo Jung Lee, Min Jin Go et al.             Cytometry meets next-generation sequencing – RNA-Seq of sorted subpopulations reveals regional replication and iron-triggered prophage induction in Corynebacterium glutamicum ▶     Raphael Freiherr von Boeselager, Eugen Pfeifer, Julia Frunzke             Spatial congruence between multiple stressors in the Mediterranean Sea may reduce its resilience to climate impacts ▶     Francisco Ramírez, Marta Coll, Joan Navarro et al.             Novel multiplex PCR-SSP method for centromeric KIR allele discrimination ▶     Jean-Benoît Le Luduec, Anupa Kudva, Jeanette E. Boudreau et al.             VOC breath profile in spontaneously breathing awake swine during Influenza A infection ▶     Selina Traxler, Ann-Christin Bischoff, Radost Saß et al.             Recommendations for improving accuracy of gene expression data in bone and cartilage tissue engineering ▶     Tao He, Yijiang Huang, Juy Chi Chak et al.             First assessment of the comparative toxicity of ivermectin and moxidectin in adult dung beetles: Sub-lethal symptoms and pre-lethal consequences ▶     José R. Verdú, Vieyle Cortez, Juan Martinez-Pinna et al.             Splenectomy modulates early immuno-inflammatory responses to trauma-hemorrhage and protects mice against secondary sepsis ▶     S. Drechsler, J. Zipperle, P. Rademann et al.             A genomic Neolithic time transect of hunter-farmer admixture in central Poland ▶     D. M. Fernandes, D. Strapagiel, P. Borówka et al.             Technology Transfer of the Microphysiological Systems: A Case Study of the Human Proximal Tubule Tissue Chip ▶     Courtney Sakolish, Elijah J. Weber, Edward J. Kelly et al.             The DNA Repair Protein OGG1 Protects Against Obesity by Altering Mitochondrial Energetics in White Adipose Tissue ▶     Sai Santosh Babu Komakula, Jana Tumova, Deeptha Kumaraswamy et al.             Ankyrin Repeat Domain 1 Overexpression is Associated with Common Resistance to Afatinib and Osimertinib in EGFR-mutant Lung Cancer ▶     Akiko Takahashi, Masahiro Seike, Mika Chiba et al.             Relationship between Ocular Deviation and Visual Function in Retinitis Pigmentosa ▶     Manabu Miyata, Akio Oishi, Ken Ogino et al.             Site-Specific Labelling of Multidomain Proteins by Amber Codon Suppression ▶     Christina S. Heil, Alexander Rittner, Bjarne Goebel et al.             Pathological macromolecular crystallographic data affected by twinning, partial-disorder and exhibiting multiple lattices for testing of data processing and refinement tools ▶     Ivan Campeotto, Andrey Lebedev, Antoine M. M. Schreurs et al.             Phylogenetics of Mycoplasma hominis clinical strains associated with gynecological infections or infertility as disclosed by an expanded multilocus sequence typing scheme ▶     Safa Boujemaa, Amina Ben Allaya, Béhija Mlik et al.             Contribution of SPI-1 bistability to Salmonella enterica cooperative virulence: insights from single cell analysis ▶     María Antonia Sánchez-Romero, Josep Casadesús             Phenology determines the robustness of plant–pollinator networks ▶     Rodrigo Ramos–Jiliberto, Pablo Moisset de Espanés, Mauricio Franco–Cisterna et al.             Dual Porosity Protein-based Scaffolds with Enhanced Cell Infiltration and Proliferation ▶     Morteza Rasoulianboroujeni, Nasim Kiaie, Fahimeh Sadat Tabatabaei et al.             Structural insights into pro-aggregation effects of C. elegans CRAM-1 and its human ortholog SERF2 ▶     Meenakshisundaram Balasubramaniam, Srinivas Ayyadevara, Robert J. Shmookler Reis             Fiber-bundle illumination: realizing high-degree time-multiplexed multifocal multiphoton microscopy with simplicity ▶     Jiun-Yann Yu, Sunduck Kim, Young Bo Shim et al.             Temporal differentiation of bovine airway epithelial cells grown at an air-liquid interface ▶     Daniel Cozens, Erin Sutherland, Francesco Marchesi et al.             Alteration of Serum Free Fatty Acids are Indicators for Progression of Pre-leukaemia Diseases to Leukaemia ▶     Ayesha Khalid, Amna Jabbar Siddiqui, Jian-Hua Huang et al.             Epidemiology, microbiology and therapeutic consequences of chronic osteomyelitis in northern China: A retrospective analysis of 255 Patients ▶     Xianzhi Ma, Shengshou Han, Jun Ma et al.             Mathematical Modeling and Analyses of Interspike-Intervals of Spontaneous Activity in Afferent Neurons of the Zebrafish Lateral Line ▶     Sangmin Song, Ji Ah Lee, Ilya Kiselev et al.             Evidence of a Causal Role for mid-Ventrolateral Prefrontal Cortex Based Functional Networks in Retrieving High-Fidelity Memory ▶     Peter E. Wais, Olivia Montgomery, Craig E. L. Stark et al.             Developmental asynchrony and antagonism of sex determination pathways in a lizard with temperature-induced sex reversal ▶     Sarah L. Whiteley, Vera Weisbecker, Arthur Georges et al.             Oleoylethanolamide treatment affects gut microbiota composition and the expression of intestinal cytokines in Peyer’s patches of mice ▶     Monica Di Paola, Elena Bonechi, Gustavo Provensi et al.             Enhancement of PCR Sensitivity and Yield Using Thiol-modified Primers ▶     Yalong Bai, Yi Xiao, Yujuan Suo et al.             Oenological traits of Lachancea thermotolerans show signs of domestication and allopatric differentiation ▶     Ana Hranilovic, Joanna M. Gambetta, Leigh Schmidtke et al.             Molecular characterization, antimicrobial resistance and clinico-bioinformatics approaches to address the problem of extended-spectrum β-lactamase-producing Escherichia coli in western Saudi Arabia ▶     Muhammad Yasir, Abeer M. Ajlan, Shazi Shakil et al.             Conscious processing of auditory regularities induces a pupil dilation ▶     Marion Quirins, Clémence Marois, Mélanie Valente et al.             Categorical emotion recognition from voice improves during childhood and adolescence ▶     Marie-Hélène Grosbras, Paddy D. Ross, Pascal Belin             Mutation pattern analysis reveals polygenic mini-drivers associated with relapse after surgery in lung adenocarcinoma ▶     Laura Bennett, Matthew Howell, Danish Memon et al.             Influence of water quality on diversity and composition of fungal communities in a tropical river ▶     Mabel Patricia Ortiz-Vera, Luiz Ricardo Olchanheski, Eliane Gonçalves da Silva et al.             Continuous theta-burst stimulation over the dorsolateral prefrontal cortex inhibits improvement on a working memory task ▶     Teodóra Vékony, Viola Luca Németh, Adrienn Holczer et al.             Genetic inhibition of an ATP synthase subunit extends lifespan in C. elegans ▶     Chen Xu, Wooseon Hwang, Dae-Eun Jeong et al.             Calcineurin B homologous protein 3 binds with high affinity to the CHP binding domain of the human sodium/proton exchanger NHE1 ▶     Simon Fuchs, Sierra C. Hansen, Marie Markones et al.             Humanization of Antibodies using a Statistical Inference Approach ▶     Alejandro Clavero-Álvarez, Tomas Di Mambro, Sergio Perez-Gaviro et al.             Extracts of Polypore Mushroom Mycelia Reduce Viruses in Honey Bees ▶     Paul E. Stamets, Nicholas L. Naeger, Jay D. Evans et al.             A multisubstrate reductase from Plantago major: structure-function in the short chain reductase superfamily ▶     Rachel Fellows, Christopher M. Russo, Catarina S. Silva et al.             Pattern to Knowledge: Deep Knowledge-Directed Machine Learning for Residue-Residue Interaction Prediction ▶     Andrew K. C. Wong, Ho Yin Sze-To, Gary L. Johanning             Metabarcoding of marine environmental DNA based on mitochondrial and nuclear genes ▶     Babett Günther, Thomas Knebelsberger, Hermann Neumann et al.             Comparative synaptosome imaging: a semi-quantitative method to obtain copy numbers for synaptic and neuronal proteins ▶     Katharina N. Richter, Hanna Wildhagen, Martin S. Helm et al.             Increased spatial and temporal autocorrelation of temperature under climate change ▶     Grace J. Di Cecco, Tarik C. Gouhier             FGF-7 Dictates Osteocyte Cell Processes Through Beta-Catenin Transduction ▶     Xiao-Yu Liu, Xin Li, Ming-Ru Bai et al.             Analysis of the mechanisms regulating the expression of isoprenoid biosynthesis genes in hydroponically-grown Nicotiana benthamiana plants using virus-induced gene silencing ▶     Go Atsumi, Uiko Kagaya, Noriko Tabayashi et al.             A handheld platform for target protein detection and quantification using disposable nanopore strips ▶     Trevor J. Morin, William L. McKenna, Tyler D. Shropshire et al.             Quantum Artificial Life in an IBM Quantum Computer ▶     U. Alvarez-Rodriguez, M. Sanz, L. Lamata et al.             Two Engineered OBPs with opposite temperature-dependent affinities towards 1-aminoanthracene ▶     Filipa Gonçalves, Tarsila G. Castro, Nuno G. Azoia et al.             Fast robust dose calculation on GPU for high-precision 1H, 4He, 12C and 16O ion therapy: the FRoG platform ▶     Stewart Mein, Kyungdon Choi, Benedikt Kopp et al.             Determination of the Main Phase Transition Temperature of Phospholipids by Nanoplasmonic Sensing ▶     Wen Chen, Filip Duša, Joanna Witos et al.             Laboratory diagnostics of murine blood for detection of mouse cytomegalovirus (MCMV)-induced hepatitis ▶     Felix R. Stahl, Roman Jung, Virginija Jazbutyte et al.             Mutation of TP53, translocation analysis and immunohistochemical expression of MYC, BCL-2 and BCL-6 in patients with DLBCL treated with R-CHOP ▶     Pekka Peroja, Mette Pedersen, Tuomo Mantere et al.             Preparation of cationized gelatin nanospheres incorporating molecular beacon to visualize cell apoptosis ▶     Yuki Murata, Jun-ichiro Jo, Yasuhiko Tabata             Positive Caricature Transcriptomic Effects Associated with Broad Genomic Aberrations in Colorectal Cancer ▶     Daniele F. Condorelli, Giorgia Spampinato, Giovanna Valenti et al.             Leptin Increases Particle-Induced Osteolysis in Female ob/ob Mice ▶     Kenneth A. Philbrick, Adam J. Branscum, Carmen P. Wong et al.             The Long-term Outcome After Resection of Upper Cervical Spinal Cord Tumors: Report of 51 Consecutive Cases ▶     Xin Wang, Jun Gao, Tianyu Wang et al.             Experimental evidence of selective inattention in reputation-based cooperation ▶     Isamu Okada, Hitoshi Yamamoto, Yoshiki Sato et al.             Effect of central lesions on a spinal circuit facilitating human wrist flexors ▶     Stefane A. Aguiar, Supriyo Choudhury, Hrishikesh Kumar et al.             Cell-based chemical fingerprinting identifies telomeres and lamin A as modifiers of DNA damage response in cancer cells ▶     Chiaki Fujiwara, Yukiko Muramatsu, Megumi Nishii et al.             The endless visuomotor calibration of reach-to-grasp actions ▶     Robert Volcic, Fulvio Domini             A Next-Generation Sequencing-Based Platform for Quantitative Detection of Hepatitis B Virus Pre-S Mutants in Plasma of Hepatocellular Carcinoma Patients ▶     Chiao-Fang Teng, Hsi-Yuan Huang, Tsai-Chung Li et al.             A-to-I RNA editing enzyme ADAR2 regulates light-induced circadian phase-shift ▶     Hideki Terajima, Hikari Yoshitane, Tomoko Yoshikawa et al.             Photoacclimation strategies in northeastern Atlantic seagrasses: Integrating responses across plant organizational levels ▶     Nadine Schubert, Cátia Freitas, André Silva et al.             Genome-wide analysis of horizontally acquired genes in the genus Mycobacterium ▶     Arup Panda, Michel Drancourt, Tamir Tuller et al.             Structural Analysis of Inhibitor Binding to CAMKK1 Identifies Features Necessary for Design of Specific Inhibitors ▶     André da Silva Santiago, Rafael M. Couñago, Priscila Zonzini Ramos et al.             Systematic expression alteration analysis of master reprogramming factor OCT4 and its three pseudogenes in human cancer and their prognostic outcomes ▶     Subbroto Kumar Saha, Yeojin Jeong, Sungha Cho et al.             Drivers of within-field spatial and temporal variability of crop yield across the US Midwest ▶     Bernardo Maestrini, Bruno Basso             Low dose dimethyl sulfoxide driven gross molecular changes have the potential to interfere with various cellular processes ▶     Sinem Tunçer, Rafig Gurbanov, Ilir Sheraj et al.             Patients with Chronic Obstructive Pulmonary Disease harbour a variation of Haemophilus species ▶     Karen L. Osman, Johanna M. C. Jefferies, Christopher H. Woelk et al.             Closing water productivity gaps to achieve food and water security for a global maize supply ▶     Huifang Zheng, Qianqian Bian, Yulong Yin et al.             Activity of a novel antimicrobial peptide against Pseudomonas aeruginosa biofilms ▶     Trevor Beaudoin, Tracy A. Stone, Miroslawa Glibowicka et al.             Nuclear expansion and pore opening are instant signs of neuronal hypoxia and can identify poorly fixed brains ▶     Anisa Dehghani, Hulya Karatas, Alp Can et al.             The interactions between botulinum-toxin-based facial treatments and embodied emotions ▶     Michael B. Lewis             Human neural stem cell transplantation improves cognition in a murine model of Alzheimer’s disease ▶     Lisa M. McGinley, Osama N. Kashlan, Elizabeth S. Bruno et al.             A novel design to screen chlorogenic acid-producing microbial strains from the environment ▶     Xiao Wang, Lifang Qin, Jia Zhou et al.             A rust fungal effector binds plant DNA and modulates transcription ▶     Md Bulbul Ahmed, Karen Cristine Gonçalves dos Santos, Ingrid Benerice Sanchez et al.             Absence of Parallel Fibre to Purkinje Cell LTD During Eyeblink Conditioning ▶     Fredrik Johansson, Dan-Anders Jirenhed, Anders Rasmussen et al.             Maternal high-fat diet consumption induces sex-dependent alterations of the endocannabinoid system and redox homeostasis in liver of adult rat offspring ▶     Rosiane Aparecida Miranda, Mariana Macedo De Almeida, Camilla Pereira Dias Da Rocha et al.             Complex rice systems to improve rice yield and yield stability in the face of variable weather conditions ▶     Uma Khumairoh, Egbert A. Lantinga, Rogier P. O. Schulte et al.             Voice-selective prediction alterations in nonclinical voice hearers ▶     Ana P. Pinheiro, Michael Schwartze, Sonja A. Kotz             Monitoring of microbial dynamics in a drinking water distribution system using the culture-free, user-friendly, MYcrobiota platform ▶     Stefan A. Boers, Emmanuelle I. Prest, Maja Taučer-Kapteijn et al.             Mucociliary Clearance in Mice Measured by Tracking Trans-tracheal Fluorescence of Nasally Aerosolized Beads ▶     Troy D. Rogers, Lawrence E. Ostrowski, Alessandra Livraghi-Butrico et al.             The use of natural media amendments to produce kale enhanced with functional lipids in controlled environment production system ▶     Natalia P. Vidal, Huong T. Pham, Charles Manful et al.             Longitudinal changes in physical capacity from adolescence to middle age in men and women ▶     M. Westerståhl, E. Jansson, M. Barnekow-Bergkvist et al.             A Comparative Study of Hummingbirds and Chickens Provides Mechanistic Insight on the Histidine Containing Dipeptide Role in Skeletal Muscle Metabolism ▶     E. Dolan, B. Saunders, W. S. Dantas et al.             The relationship between transgenerational acquired resistance and global DNA methylation in Arabidopsis ▶     Joost H. M. Stassen, Ana López, Ritushree Jain et al.             Benefits of soil biochar amendments to tomato growth under saline water irrigation ▶     Dongli She, Xiaoqin Sun, Agbna H. D. Gamareldawla et al.             Caloric restriction promotes functional changes involving short-chain fatty acid biosynthesis in the rat gut microbiota ▶     Alessandro Tanca, Marcello Abbondio, Antonio Palomba et al.             Inhibition of the gyrA promoter by transcription-coupled DNA supercoiling in Escherichia coli ▶     Samantha Dages, Kelley Dages, Xiaoduo Zhi et al.             Photosystem-II D1 protein mutants of Chlamydomonas reinhardtii in relation to metabolic rewiring and remodelling of H-bond network at QB site ▶     Amina Antonacci, Maya D. Lambreva, Andrea Margonelli et al.             CLIC1 and CLIC4 complement CA125 as a diagnostic biomarker panel for all subtypes of epithelial ovarian cancer ▶     Bipradeb Singha, Sandra L. Harper, Aaron R. Goldman et al.             Profiling inflammatory markers in patients with pneumonia on intensive care ▶     David B. Antcliffe, Arnaud M. Wolfer, Kieran P. O’Dea et al.             moxMaple3: a Photoswitchable Fluorescent Protein for PALM and Protein Highlighting in Oxidizing Cellular Environments ▶     Andrii A. Kaberniuk, Manuel A. Mohr, Vladislav V. Verkhusha et al.             Influence of ylHog1 MAPK kinase on Yarrowia lipolytica stress response and erythritol production ▶     Dorota A. Rzechonek, Alison M. Day, Janet Quinn et al.             A Dexterous, Glove-Based Teleoperable Low-Power Soft Robotic Arm for Delicate Deep-Sea Biological Exploration ▶     Brennan T. Phillips, Kaitlyn P. Becker, Shunichi Kurumaya et al.             A toolbox for multiplexed super-resolution imaging of the E. coli nucleoid and membrane using novel PAINT labels ▶     Christoph K. Spahn, Mathilda Glaesmann, Jonathan B. Grimm et al.             Antarctic marine ciliates under stress: superoxide dismutases from the psychrophilic Euplotes focardii are cold-active yet heat tolerant enzymes ▶     Alessandro Pischedda, Kesava Priyan Ramasamy, Marco Mangiagalli et al.             Bufonid herpesvirus 1 (BfHV1) associated dermatitis and mortality in free ranging common toads (Bufo bufo) in Switzerland ▶     Francesco C. Origgi, Benedikt R. Schmidt, Petra Lohmann et al.             Surface-modified three-dimensional graphene nanosheets as a stationary phase for chromatographic separation of chiral drugs ▶     Lindsay Candelaria, Liliya V. Frolova, Brian M. Kowalski et al.             Two coupled circadian oscillations regulate Bmal1-ELuc and Per2-SLR2 expression in the mouse suprachiasmatic nucleus ▶     Shinya Nishide, Sato Honma, Ken-ichi Honma             Connectivity of larval stages of sedentary marine communities between hard substrates and offshore structures in the North Sea ▶     Johan van der Molen, Luz María García-García, Paul Whomersley et al.             Cholesterol is Inefficiently Converted to Cholesteryl Esters in the Blood of Cardiovascular Disease Patients ▶     Mathias J. Gerl, Winchil L. C. Vaz, Neuza Domingues et al.             Social and nutritional factors shape larval aggregation, foraging, and body mass in a polyphagous fly ▶     Juliano Morimoto, Binh Nguyen, Shabnam Tarahi Tabrizi et al.             Novel millimeter-wave-based method for in situ cell isolation and other applications ▶     Barney Boyce, Natalia Samsonova             Impaired tumor growth and angiogenesis in mice heterozygous for Vegfr2 (Flk1) ▶     Sunday S. Oladipupo, Ashraf Ul Kabir, Craig Smith et al.             CPP-Ts: a new intracellular calcium channel modulator and a promising tool for drug delivery in cancer cells ▶     Bárbara Bruna Ribeiro de Oliveira-Mendes, Carolina Campolina Rebello Horta, Anderson Oliveira do Carmo et al.             Human serum albumin alters specific genes that can play a role in survival and persistence in Acinetobacter baumannii ▶     Brettni Quinn, Nyah Rodman, Eugenio Jara et al.             Kidney-derived c-kit+ progenitor/stem cells contribute to podocyte recovery in a model of acute proteinuria ▶     Erika B. Rangel, Samirah A. Gomes, Rosemeire Kanashiro-Takeuchi et al.             NF-κB-related decrease of glioma angiogenic potential by graphite nanoparticles and graphene oxide nanoplatelets ▶     Mateusz Wierzbicki, Ewa Sawosz, Barbara Strojny et al.             Reappraising the microscopic anatomy of human testis: identification of telocyte networks in the peritubular and intertubular stromal space ▶     Mirca Marini, Irene Rosa, Daniele Guasti et al.                 • Scientific Reports events Directory featured events           natureevents directory featured events         Cold Spring Harbor Asia Conference on Single Cell     05.11.18 Suzhou, China         Natureevents 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