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The ISME Journal - Table of Contents alert Volume 11 Issue 3

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Volume 11, Issue 3 (March 2017)

In this issue
Original Articles
Short Communications

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Original Articles


Evolutionary convergence in experimental Pseudomonas populations

Peter A Lind, Andrew D Farr and Paul B Rainey

ISME J 2017 11: 589-600; advance online publication, December 2, 2016; 10.1038/ismej.2016.157

Abstract | Full Text

Temperature is a key factor in Micromonas–virus interactions

David Demory, Laure Arsenieff, Nathalie Simon, Christophe Six, Fabienne Rigaut-Jalabert, Dominique Marie, Pei Ge, Estelle Bigeard, Stéphan Jacquet, Antoine Sciandra, Olivier Bernard, Sophie Rabouille and Anne-Claire Baudoux

ISME J 2017 11: 601-612; advance online publication, January 13, 2017; 10.1038/ismej.2016.160

Abstract | Full Text

Warming and nutrient enrichment in combination increase stochasticity and beta diversity of bacterioplankton assemblages across freshwater mesocosms

Lijuan Ren, Dan He, Zhen Chen, Erik Jeppesen, Torben L Lauridsen, Martin Søndergaard, Zhengwen Liu and Qinglong L Wu

ISME J 2017 11: 613-625; advance online publication, December 9, 2016; 10.1038/ismej.2016.159

Abstract | Full Text

Refined experimental annotation reveals conserved corrinoid autotrophy in chloroform-respiring Dehalobacter isolates

Po-Hsiang Wang, Shuiquan Tang, Kayla Nemr, Robert Flick, Jun Yan, Radhakrishnan Mahadevan, Alexander F Yakunin, Frank E Löffler and Elizabeth A Edwards

ISME J 2017 11: 626-640; advance online publication, November 29, 2016; 10.1038/ismej.2016.158

Abstract | Full Text

Elevated temperature increases carbon and nitrogen fluxes between phytoplankton and heterotrophic bacteria through physical attachment

Nestor Arandia-Gorostidi, Peter K Weber, Laura Alonso-Sáez, Xosé Anxelu G Morán and Xavier Mayali

ISME J 2017 11: 641-650; advance online publication, December 6, 2016; 10.1038/ismej.2016.156

Abstract | Full Text

Co-occurrence of antibiotic and metal resistance genes revealed in complete genome collection

Li-Guan Li, Yu Xia and Tong Zhang

ISME J 2017 11: 651-662; advance online publication, December 13, 2016; 10.1038/ismej.2016.155

Abstract | Full Text

Helminth burden and ecological factors associated with alterations in wild host gastrointestinal microbiota OPEN

Lindsay K Newbold, Sarah J Burthe, Anna E Oliver, Hyun S Gweon, Christopher J Barnes, Francis Daunt and Christopher J van der Gast

ISME J 2017 11: 663-675; advance online publication, December 16, 2016; 10.1038/ismej.2016.153

Abstract | Full Text

Environmental spread of microbes impacts the development of metabolic phenotypes in mice transplanted with microbial communities from humans

Li Zhang, Martin Iain Bahl, Henrik Munch Roager, Cilius Esmann Fonvig, Lars I Hellgren, Henrik Lauritz Frandsen, Oluf Pedersen, Jens-Christian Holm, Torben Hansen and Tine Rask Licht

ISME J 2017 11: 676-690; advance online publication, November 18, 2016; 10.1038/ismej.2016.151

Abstract | Full Text

New roles in hemicellulosic sugar fermentation for the uncultivated Bacteroidetes family BS11 OPEN

Lindsey M Solden, David W Hoyt, William B Collins, Johanna E Plank, Rebecca A Daly, Erik Hildebrand, Timothy J Beavers, Richard Wolfe, Carrie D Nicora, Sam O Purvine, Michelle Carstensen, Mary S Lipton, Donald E Spalinger, Jeffrey L Firkins, Barbara A Wolfe and Kelly C Wrighton

ISME J 2017 11: 691-703; advance online publication, December 13, 2016; 10.1038/ismej.2016.150

Abstract | Full Text

Enhanced microbial electrosynthesis by using defined co-cultures

Jörg S Deutzmann and Alfred M Spormann

ISME J 2017 11: 704-714; advance online publication, November 1, 2016; 10.1038/ismej.2016.149

Abstract | Full Text

Convergent patterns in the evolution of mealybug symbioses involving different intrabacterial symbionts OPEN

Gitta Szabó, Frederik Schulz, Elena R Toenshoff, Jean-Marie Volland, Omri M Finkel, Shimshon Belkin and Matthias Horn

ISME J 2017 11: 715-726; advance online publication, December 16, 2016; 10.1038/ismej.2016.148

Abstract | Full Text

Coupled molecular and isotopic evidence for denitrifier controls over terrestrial nitrogen availability

Erin F E Lennon and Benjamin Z Houlton

ISME J 2017 11: 727-740; advance online publication, December 9, 2016; 10.1038/ismej.2016.147

Abstract | Full Text

Redox potential as a master variable controlling pathways of metal reduction by Geobacter sulfurreducens OPEN

Caleb E Levar, Colleen L Hoffman, Aubrey J Dunshee, Brandy M Toner and Daniel R Bond

ISME J 2017 11: 741-752; advance online publication, January 3, 2017; 10.1038/ismej.2016.146

Abstract | Full Text

Use of plankton-derived vitamin B1 precursors, especially thiazole-related precursor, by key marine picoeukaryotic phytoplankton OPEN

Ryan W Paerl, Francois-Yves Bouget, Jean-Claude Lozano, Valérie Vergé, Philippe Schatt, Eric E Allen, Brian Palenik and Farooq Azam

ISME J 2017 11: 753-765; advance online publication, December 9, 2016; 10.1038/ismej.2016.145

Abstract | Full Text

Genome of ‘Ca. Desulfovibrio trichonymphae’, an H2-oxidizing bacterium in a tripartite symbiotic system within a protist cell in the termite gut OPEN

Hirokazu Kuwahara, Masahiro Yuki, Kazuki Izawa, Moriya Ohkuma and Yuichi Hongoh

ISME J 2017 11: 766-776; advance online publication, November 1, 2016; 10.1038/ismej.2016.143

Abstract | Full Text

Influence of phylogenetic conservatism and trait convergence on the interactions between fungal root endophytes and plants

Sevda Haghi Kia, Kyriaki Glynou, Thomas Nau, Marco Thines, Meike Piepenbring and Jose G Maciá-Vicente

ISME J 2017 11: 777-790; advance online publication, November 1, 2016; 10.1038/ismej.2016.140

Abstract | Full Text

A family of interaction-adjusted indices of community similarity OPEN

Thomas Sebastian Benedikt Schmidt, João Frederico Matias Rodrigues and Christian von Mering

ISME J 2017 11: 791-807; advance online publication, December 9, 2016; 10.1038/ismej.2016.139

Abstract | Full Text

Short Communications


Evidence for a role of viruses in the thermal sensitivity of coral photosymbionts

Rachel Ashley Levin, Christian Robert Voolstra, Karen Dawn Weynberg and Madeleine Josephine Henriette van Oppen

ISME J 2017 11: 808-812; advance online publication, December 2, 2016; 10.1038/ismej.2016.154

Abstract | Full Text

Tick microbiome and pathogen acquisition altered by host blood meal

Andrea Swei and Jessica Y Kwan

ISME J 2017 11: 813-816; advance online publication, November 18, 2016; 10.1038/ismej.2016.152

Abstract | Full Text

The prey’s scent – Volatile organic compound mediated interactions between soil bacteria and their protist predators

Kristin Schulz-Bohm, Stefan Geisen, E R Jasper Wubs, Chunxu Song, Wietse de Boer and Paolina Garbeva

ISME J 2017 11: 817-820; advance online publication, December 2, 2016; 10.1038/ismej.2016.144

Abstract | Full Text

Assessment of the bimodality in the distribution of bacterial genome sizes

Hyun S Gweon, Mark J Bailey and Daniel S Read

ISME J 2017 11: 821-824; advance online publication, November 11, 2016; 10.1038/ismej.2016.142

Abstract | Full Text

Direct single-cell biomass estimates for marine bacteria via Archimedes’ principle

Nathan Cermak, Jamie W Becker, Scott M Knudsen, Sallie W Chisholm, Scott R Manalis and Martin F Polz

ISME J 2017 11: 825-828; advance online publication, December 6, 2016; 10.1038/ismej.2016.161

Abstract | Full Text

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