Wednesday, October 22, 2014

The ISME Journal - Table of Contents alert Volume 8 Issue 11

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The ISME Journal

TABLE OF CONTENTS

Volume 8, Issue 11 (November 2014)

In this issue
Original Articles
Commentary
Corrigendum

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Original Articles

Top

Anaerobic oxidation of long-chain n-alkanes by the hyperthermophilic sulfate-reducing archaeon, Archaeoglobus fulgidus

Nadia Khelifi, Oulfat Amin Ali, Philippe Roche, Vincent Grossi, Céline Brochier-Armanet, Odile Valette, Bernard Ollivier, Alain Dolla and Agnès Hirschler-Réa

ISME J 2014 8: 2153-2166; advance online publication, April 24, 2014; 10.1038/ismej.2014.58

Abstract | Full Text

Composition and enzymatic function of particle-associated and free-living bacteria: a coastal/offshore comparison

Lindsay D'Ambrosio, Kai Ziervogel, Barbara MacGregor, Andreas Teske and Carol Arnosti

ISME J 2014 8: 2167-2179; advance online publication, April 24, 2014; 10.1038/ismej.2014.67

Abstract | Full Text

Facets of diazotrophy in the oxygen minimum zone waters off Peru

Carolin R Loescher, Tobias Großkopf, Falguni D Desai, Diana Gill, Harald Schunck, Peter L Croot, Christian Schlosser, Sven C Neulinger, Nicole Pinnow, Gaute Lavik, Marcel M M Kuypers, Julie LaRoche and Ruth A Schmitz

ISME J 2014 8: 2180-2192; advance online publication, May 9, 2014; 10.1038/ismej.2014.71

Abstract | Full Text

Reprograming of gut microbiome energy metabolism by the FUT2 Crohn’s disease risk polymorphism OPEN

Maomeng Tong, Ian McHardy, Paul Ruegger, Maryam Goudarzi, Purna C Kashyap, Talin Haritunians, Xiaoxiao Li, Thomas G Graeber, Emma Schwager, Curtis Huttenhower, Albert J Fornace, Jr, Justin L Sonnenburg, Dermot PB McGovern, James Borneman and Jonathan Braun

ISME J 2014 8: 2193-2206; advance online publication, April 29, 2014; 10.1038/ismej.2014.64

Abstract | Full Text

Amphibian skin may select for rare environmental microbes

Jenifer B Walke, Matthew H Becker, Stephen C Loftus, Leanna L House, Guy Cormier, Roderick V Jensen and Lisa K Belden

ISME J 2014 8: 2207-2217; advance online publication, May 23, 2014; 10.1038/ismej.2014.77

Abstract | Full Text

Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men

Anne Salonen, Leo Lahti, Jarkko Salojärvi, Grietje Holtrop, Katri Korpela, Sylvia H Duncan, Priya Date, Freda Farquharson, Alexandra M Johnstone, Gerald E Lobley, Petra Louis, Harry J Flint and Willem M de Vos

ISME J 2014 8: 2218-2230; advance online publication, April 24, 2014; 10.1038/ismej.2014.63

Abstract | Full Text

Arbuscular mycorrhizal fungal communities are phylogenetically clustered at small scales

Sebastian Horn, Tancredi Caruso, Erik Verbruggen, Matthias C Rillig and Stefan Hempel

ISME J 2014 8: 2231-2242; advance online publication, May 13, 2014; 10.1038/ismej.2014.72

Abstract | Full Text

Inference of interactions in cyanobacterial–heterotrophic co-cultures via transcriptome sequencing

Alexander S Beliaev, Margie F Romine, Margrethe Serres, Hans C Bernstein, Bryan E Linggi, Lye M Markillie, Nancy G Isern, William B Chrisler, Leo A Kucek, Eric A Hill, Grigoriy E Pinchuk, Donald A Bryant, H Steven Wiley, Jim K Fredrickson and Allan Konopka

ISME J 2014 8: 2243-2255; advance online publication, April 29, 2014; 10.1038/ismej.2014.69

Abstract | Full Text

Cross-feeding and interkingdom communication in dual-species biofilms of Streptococcus mutans and Candida albicans

Helena Sztajer, Szymon P Szafranski, Jürgen Tomasch, Michael Reck, Manfred Nimtz, Manfred Rohde and Irene Wagner-Döbler

ISME J 2014 8: 2256-2271; advance online publication, May 13, 2014; 10.1038/ismej.2014.73

Abstract | Full Text

Climate change affects key nitrogen-fixing bacterial populations on coral reefs

Henrique F Santos, Flávia L Carmo, Gustavo Duarte, Francisco Dini-Andreote, Clovis B Castro, Alexandre S Rosado, Jan Dirk van Elsas and Raquel S Peixoto

ISME J 2014 8: 2272-2279; advance online publication, May 16, 2014; 10.1038/ismej.2014.70

Abstract | Full Text

Efficient CO2 fixation by surface Prochlorococcus in the Atlantic Ocean OPEN

Manuela Hartmann, Paola Gomez-Pereira, Carolina Grob, Martin Ostrowski, David J Scanlan and Mikhail V Zubkov

ISME J 2014 8: 2280-2289; advance online publication, April 24, 2014; 10.1038/ismej.2014.56

Abstract | Full Text

Features of air masses associated with the deposition of Pseudomonas syringae and Botrytis cinerea by rain and snowfall

Caroline L Monteil, Marc Bardin and Cindy E Morris

ISME J 2014 8: 2290-2304; advance online publication, April 10, 2014; 10.1038/ismej.2014.55

Abstract | Full Text

Molecular and biogeochemical evidence for methane cycling beneath the western margin of the Greenland Ice Sheet

Markus Dieser, Erik L J E Broemsen, Karen A Cameron, Gary M King, Amanda Achberger, Kyla Choquette, Birgit Hagedorn, Ron Sletten, Karen Junge and Brent C Christner

ISME J 2014 8: 2305-2316; advance online publication, April 17, 2014; 10.1038/ismej.2014.59

Abstract | Full Text

Phage and bacteria support mutual diversity in a narrowing staircase of coexistence

Jan O Haerter, Namiko Mitarai and Kim Sneppen

ISME J 2014 8: 2317-2326; advance online publication, May 23, 2014; 10.1038/ismej.2014.80

Abstract | Full Text

River organic matter shapes microbial communities in the sediment of the Rhône prodelta

Sonja K Fagervold, Solveig Bourgeois, Audrey M Pruski, François Charles, Philippe Kerhervé, Gilles Vétion and Pierre E Galand

ISME J 2014 8: 2327-2338; advance online publication, May 23, 2014; 10.1038/ismej.2014.86

Abstract | Full Text

Leucine incorporation by aerobic anoxygenic phototrophic bacteria in the Delaware estuary

Monica R Stegman, Matthew T Cottrell and David L Kirchman

ISME J 2014 8: 2339-2348; advance online publication, May 13, 2014; 10.1038/ismej.2014.75

Abstract | Full Text

Commentary

Top

Estimating coverage in metagenomic data sets and why it matters

Luis M Rodriguez-R and Konstantinos T Konstantinidis

ISME J 2014 8: 2349-2351; advance online publication, May 13, 2014; 10.1038/ismej.2014.76

Full Text

Corrigendum

Top

The social structure of microbial community involved in colonization resistance

Xuesong He, Jeffrey S McLean, Lihong Guo, Renate Lux and Wenyuan Shi

ISME J 2014 8: 2352-0; 10.1038/ismej.2014.109

Full Text

Microorganisms persist at record depths in the subseafloor of the Canterbury Basin

Maria-Cristina Ciobanu, Gaëtan Burgaud, Alexis Dufresne, Anja Breuker, Vanessa Rédou, Sarah Ben Maamar, Frédéric Gaboyer, Odile Vandenabeele-Trambouze, Julius Sebastian Lipp, Axel Schippers, Philippe Vandenkoornhuyse, Georges Barbier, Mohamed Jebbar, Anne Godfroy and Karine Alain

ISME J 2014 8: 0-2352; 10.1038/ismej.2014.110

Full Text

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