Tuesday, June 11, 2013

Molecular Systems Biology - New articles published 11 June 2013

Molecular Systems Biology
Latest Articles 11th June 2013
 
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Integrative Genomics in Microbiology

REVIEW - Computational meta’omics for microbial community studies

Dissecting specific and global transcriptional regulation of bacterial gene expression

Indirect and suboptimal control of gene expression is widespread in bacteria

Shared control of gene expression in bacteria by transcription factors and global physiology of the cell

 
 

Featured Article

The functional interactome landscape of the human histone deacetylase family

This study presents the first global protein interaction network for all 11 human HDACs in T cells and an integrative mass spectrometry approach for profiling relative interaction stability within isolated protein complexes.

Preeti Joshi, Todd M Greco, Amanda J Guise, Yang Luo, Fang Yu, Alexey I Nesvizhskii & Ileana M Cristea

Molecular Systems Biology 9:672; doi:10.1038/msb.2013.26; published 11 June 2013

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Research Article

Network quantification of EGFR signaling unveils potential for targeted combination therapy

Analysis of the signaling response of colon cancer cells to systematic perturbations reveals an EGF receptor-mediated cross-talk between the MAPK and AKT pathways. Accordingly, the predicted combinatorial treatment is shown to inhibit tumor growth in vivo.

Bertram Klinger, Anja Sieber, Raphaela Fritsche-Guenther, Franziska Witzel, Leanne Berry, Dirk Schumacher, Yibing Yan, Pawel Durek, Mark Merchant, Reinhold Schäfer, Christine Sers & Nils Blüthgen

Molecular Systems Biology 9:673; doi:10.1038/msb.2013.29; published 11 June 2013

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Report

Synthetic mammalian transgene negative autoregulation

The effect of negative feedback on global and local sources of uncertainty is studied with synthetic circuits stably integrated in human cells. Negative feedback is shown to be the most efficient way to mitigate the effects of global fluctuations by introducing a single additional regulatory link.

Vinay Shimoga, Jacob T White, Yi Li, Eduardo Sontag & Leonidas Bleris

Molecular Systems Biology 9:670; doi:10.1038/msb.2013.27; published 4 June 2013

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News and Views

The HDAC interaction network

Ilana Livyatan & Eran Meshorer

Molecular Systems Biology 9:671; doi:10.1038/msb.2013.33; published 11 June 2013

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Erratum

RNAi screening reveals a large signaling network controlling the Golgi apparatus in human cells

Joanne Chia, Germaine Goh, Victor Racine, Susanne Ng, Pankaj Kumar & Frederic Bard

Molecular Systems Biology 9:677; doi:10.1038/msb.2013.34; published 11 June 2013

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