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| | | | | | Special Stress and resilience | | | | | | Stress can take many forms, from a backlog of e-mails to the trauma of war. And if stress is particularly acute or prolonged, it can damage the mind, triggering conditions from depression to post-traumatic stress disorder. Now researchers are getting to grips with how stress can alter the biology of the brain, and tip a mind into illness. Here, Nature takes a look at what they have learned so far about the impacts of adversity - and the secrets of resilience. ▼ more | | | | | | | | | | Specials - Outlook: Physics masterclass | | | | | | From subatomic particles to cosmic-scale phenomena, Nature Outlook Physics Masterclass uses the Lindau Nobel Laureate Meeting 2012 to launch an examination of some of the biggest breakthroughs in physics — featuring conversations between physics laureates and the young researchers who hope to emulate them. ▼ more | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Hamamatsu offers a wide variety of detectors for microarray scanners. They include fluorescence detectors with improved sensitivity such as side-on PMTs and PMT modules. We also offer advanced detectors, such as multianode PMTs and hybrid photodetectors, for next-generation microarray scanners. Also available are CCD and scientific CMOS cameras for high scanning throughput. | | | | | | | | | | | | | | | | | | | | | A roadmap for graphene | | Graphene, the one-atom-thick two-dimensional form of carbon, boasts a range of properties with potential practical applications and now that economic means for its mass production have been developed some of those applications may soon become realities. This review looks at recent advances in graphene research — and predicts that new technologies such as printable and flexible electronics and flexible solar cells will soon be with us. | | | | | | | | | | | | | | Closing yield gaps through nutrient and water management | | Improved nutrient and water management could boost crop production by up to 70% in some of the poorest countries of the world. A study of global data on yields for 17 major crops, along with climate, irrigation and nutrient data, shows exactly where such gains could be made. And in many areas it should be possible simply to cut back on the overuse of nutrients and water without reducing yields — even, in some cases — increasing yields by perhaps as much as 30%. | | | | | | | | | | | | | | | | In this week's podcast: a very brainy fossil, a new clue to the Earth's missing noble gas, and why city life is linked to psychosis. Plus, a round-up of the science Nobel Prizes. | | | | | | | |
| | | | | | | | | | | | | | | | | | | | | | | | Life stresses ▶ | | | | It is time for sociologists and biologists to bury the hatchet and cooperate to study the effects of environmental stress on how people behave. | | | | | | | | | | | | | | | | | | | | | | | | Stress: The roots of resilience ▶ | | | | Most people bounce back from trauma — but some never recover. Scientists are trying to work out what underlies the difference. | | | | | | | | | | | | | | | | | | | | | | | | | | | | Mental health: Under a cloud ▶ | | | | Depression is rife among graduate students and postdocs. Universities are working to get them the help they need. | | | | | | | | | | | |
| | | | | | | | | | | | | | | | | | | | | Share alike ▶ | | | | To make progress in clinical genomics, institutions must work out how to pass on data. | | | | | | | | | | | | Fighting chance ▶ | | | | Collaboration between geneticists and economists has the potential to bear fruit. | | | | | | | | | | | | | | | | | | | | | | | | Seven days: 5-11 October 2012 ▶ | | | | The week in science: Drug hope for Duchenne muscular dystrophy, Europe's nuclear plants need safety upgrade and a well-preserved mammoth is revealed in Siberia. | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
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| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Generation of functional thyroid from embryonic stem cells ▶ | | | | Francesco Antonica, Dominika Figini Kasprzyk, Robert Opitz, Michelina Iacovino, Xiao-Hui Liao et al. | | | | Transient overexpression of the transcription factors NKX2-1 and PAX8 in a murine cell model is shown to direct the differentiation of embryonic stem cells towards a thyroid follicular cell lineage; the resulting three-dimensional thyroid follicles created by subsequent thyrotropin treatment show hallmarks of thyroid function in vitro and rescue thyroid function in vivo when transplanted into athyroid mice, adding to our understanding of the molecular mechanisms underlying thyroid development. | | | | | | | | | | | | Structure of the agonist-bound neurotensin receptor ▶ | | | | Jim F. White, Nicholas Noinaj, Yoko Shibata, James Love, Brian Kloss et al. | | | | The X-ray crystal structure of a rat neurotensin receptor in complex with the C-terminal portion of neurotensin is presented; this is the first structure of a member of the β group of class A G-protein-coupled receptors. | | | | | | | | | | | | MR1 presents microbial vitamin B metabolites to MAIT cells ▶ | | | | Lars Kjer-Nielsen, Onisha Patel, Alexandra J. Corbett, Jérôme Le Nours, Bronwyn Meehan et al. | | | | The structure of the major histocompatibility complex (MHC) class I-like molecule MR1 in complex with a vitamin B9 derivative is determined; metabolites of vitamin B2 are shown to activate MR1-restricted mucosal-associated invariant T cells, implicating them in microbial immunosurveillance. | | | | | | | | | | | | | | | | Melanomas resist T-cell therapy through inflammation-induced reversible dedifferentiation ▶ | | | | Jennifer Landsberg, Judith Kohlmeyer, Marcel Renn, Tobias Bald, Meri Rogava et al. | | | | A genetically engineered mouse model is used to determine the mechanism of acquired resistance to adoptive therapy with cytotoxic T cells specific for a melanocytic differentiation antigen; tumour necrosis factor (TNF)-α is identified as a crucial factor that causes reversible dedifferentiation of mouse and human melanoma cells. | | | | | | | | | | | | EZH2 inhibition as a therapeutic strategy for lymphoma with EZH2-activating mutations ▶ | | | | Michael T. McCabe, Heidi M. Ott, Gopinath Ganji, Susan Korenchuk, Christine Thompson et al. | | | | EZH2 is a methyltransferase that is mutated in lymphoma; here a potent small molecule inhibitor of EZH2 is described, which inhibits the proliferation of EZH2 mutant cell lines and growth of EZH2 mutant xenografts in mice, thus providing a potential treatment for EZH2 mutant lymphoma. | | | | | | | | | | | | Visualizing transient low-populated structures of RNA ▶ | | | | Elizabeth A. Dethoff, Katja Petzold, Jeetender Chugh, Anette Casiano-Negroni & Hashim M. Al-Hashimi | | | | This study develops an NMR-based approach that can capture previously inaccessible, highly transient, lowly populated ‘excited states’ in RNA; the localized rearrangements in base pairing giving rise to these states are found to affect function by changing the exposure of residues required for a specific biological process. | | | | | | | | | | | | Self-renewal of embryonic-stem-cell-derived progenitors by organ-matched mesenchyme ▶ | | | | Julie B. Sneddon, Malgorzata Borowiak & Douglas A. Melton | | | | The pancreatic lineage is used as a model for embryonic-stem-cell differentiation, and shows that co-culture with organ-matched mesenchyme permits proliferation and self-renewal of progenitors, enabling an expansion of more than a million-fold for human endodermal cells with full retention of developmental potential. | | | | | | | | | | | | The spatial architecture of protein function and adaptation ▶ | | | | Richard N. McLaughlin Jr, Frank J. Poelwijk, Arjun Raman, Walraj S. Gosal & Rama Ranganathan | | | | A high-throughput mutagenesis study in a PDZ domain shows that biochemical function and adaptation primarily originate from a collectively evolving amino acid network within the structure termed a protein sector | | | | | | | | | | | | Genetic programs constructed from layered logic gates in single cells ▶ | | | | Tae Seok Moon, Chunbo Lou, Alvin Tamsir, Brynne C. Stanton & Christopher A. Voigt | | | | The creation of orthogonal ‘AND’ logic gates by combining DNA-binding proteins into complex, layered circuits opens the way to the design of programmable integrated circuits in synthetic biology. | | | | | | | | | | | | Intrinsically determined cell death of developing cortical interneurons ▶ | | | | Derek G. Southwell, Mercedes F. Paredes, Rui P. Galvao, Daniel L. Jones, Robert C. Froemke et al. | | | | The cell death of inhibitory neurons, which originate far from the cortical areas to which they migrate during embryonic development, is determined autonomously rather than by competition for trophic signals from other cell types. | | | | | | | | | | | | | | | | Small heat-shock proteins protect from heat-stroke-associated neurodegeneration ▶ | | | | Nikos Kourtis, Vassiliki Nikoletopoulou & Nektarios Tavernarakis | | | | Heat stroke triggers necrotic cell death and neurodegeneration in Caenorhabditis elegans, but hormetic preconditioning at a mildly elevated temperature strongly protects C. elegans from necrosis induced by several insults, including heat, and shields mammalian neurons from heat cytotoxicity, suggesting that this protective mechanism is conserved. | | | | | | | | | | | | Retinal waves coordinate patterned activity throughout the developing visual system ▶ | | | | James B. Ackman, Timothy J. Burbridge & Michael C. Crair | | | | In live neonatal mice, waves of spontaneous retinal activity are present and can propagate patterned information capable of guiding activity-dependent development of complex intra- and inter-hemispheric circuits throughout the visual system before the onset of vision (before eye opening). | | | | | | | | | | | | A neural circuit for spatial summation in visual cortex ▶ | | | | Hillel Adesnik, William Bruns, Hiroki Taniguchi, Z. Josh Huang & Massimo Scanziani | | | | The activity of somatostatin-expressing inhibitory neurons (SOMs) in the superficial layers of the mouse visual cortex increases with stimulation of the receptive-field surround, thereby contributing to the surround suppression of pyramidal cells. | | | | | | | | | | | | Complex brain and optic lobes in an early Cambrian arthropod ▶ | | | | Xiaoya Ma, Xianguang Hou, Gregory D. Edgecombe & Nicholas J. Strausfeld | | | | An arthropod specimen from an early Cambrian deposit in China shows a nervous system very similar to that of modern insects and crustaceans, suggesting that insect and crustacean nervous systems evolved from a relatively complex ancestral one, and that simple animals, such as branchiopod shrimps, have evolved a marked reduction in the complexity of their nervous systems. | | | | | | | | | | | | | | | | FTO genotype is associated with phenotypic variability of body mass index ▶ | | | | Jian Yang, Ruth J. F. Loos, Joseph E. Powell, Sarah E. Medland, Elizabeth K. Speliotes et al. | | | | A meta-analysis of genome-wide association studies of phenotypic variation for height and body mass index in human populations using 170,000 samples shows that one single nucleotide polymorphism at the FTO locus, which is associated with obesity, is also associated with phenotypic variation. | | | | | | | | | | | | | | | | Restoration of auditory evoked responses by human ES-cell-derived otic progenitors ▶ | | | | Wei Chen, Nopporn Jongkamonwiwat, Leila Abbas, Sarah Jacob Eshtan, Stuart L. Johnson et al. | | | | Two types of human ES-cell-derived otic progenitors are shown to have the ability to differentiate in vitro into hair-cell-like cells and auditory neurons, and to engraft, differentiate and improve auditory-evoked response thresholds when transplanted into an auditory neuropathy model; this indicates that it may be possible to use cell-based therapeutic strategies to recover damaged sensory circuitry in deafness. | | | | | | | | | | | | HIV-infected T cells are migratory vehicles for viral dissemination ▶ | | | | Thomas T. Murooka, Maud Deruaz, Francesco Marangoni, Vladimir D. Vrbanac, Edward Seung et al. | | | | Using intravital microscopy, this study visualizes HIV-1-infected T cells within the lymph nodes of humanized mice, demonstrating that infected cells have reduced motility and long membrane processes; treating infected mice with a lymphocyte egress inhibitor prevents HIV-1 from spreading to the circulation during the course of treatment. | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| | | | | | | | | | | | | | The Gel Doc™ EZ imager from Bio-Rad delivers high-quality gel images and analysis with ease and accuracy. Simply slide in the sample tray, press a single button, and you'll get publication-ready images in just seconds. Its compact size also frees up bench space. To learn more, go to http://www.bio-rad.com/ad/GelDocEZ | | | | | | | | | | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Structure of the agonist-bound neurotensin receptor ▶ | | | | Jim F. White, Nicholas Noinaj, Yoko Shibata, James Love, Brian Kloss et al. | | | | The X-ray crystal structure of a rat neurotensin receptor in complex with the C-terminal portion of neurotensin is presented; this is the first structure of a member of the β group of class A G-protein-coupled receptors. | | | | | | | | | | | | The origin of the terrestrial noble-gas signature ▶ | | | | Svyatoslav S. Shcheka & Hans Keppler | | | | The solubility of argon in lower mantle minerals is shown to be much higher than for xenon, so that the depletion of xenon relative to argon in Earth’s atmosphere can be explained by mantle degassing. | | | | | | | | | | | | The spatial architecture of protein function and adaptation ▶ | | | | Richard N. McLaughlin Jr, Frank J. Poelwijk, Arjun Raman, Walraj S. Gosal & Rama Ranganathan | | | | A high-throughput mutagenesis study in a PDZ domain shows that biochemical function and adaptation primarily originate from a collectively evolving amino acid network within the structure termed a protein sector | | | | | | | | | | | | | | | | The hexadehydro-Diels–Alder reaction ▶ | | | | Thomas R. Hoye, Beeraiah Baire, Dawen Niu, Patrick H. Willoughby & Brian P. Woods | | | | The de novo generation of benzynes—through a hexadehydro-Diels–Alder reaction—followed by their in situ elaboration is reported; the reaction is metal-free and reagent-free, and reveals new modes of intrinsic benzyne reactivity. | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Genetic programs constructed from layered logic gates in single cells ▶ | | | | Tae Seok Moon, Chunbo Lou, Alvin Tamsir, Brynne C. Stanton & Christopher A. Voigt | | | | The creation of orthogonal ‘AND’ logic gates by combining DNA-binding proteins into complex, layered circuits opens the way to the design of programmable integrated circuits in synthetic biology. | | | | | | | | | | | | | | | | | | | | Probing graphene grain boundaries with optical microscopy ▶ | | | | Dinh Loc Duong, Gang Hee Han, Seung Mi Lee, Fethullah Gunes, Eun Sung Kim et al. | | | | A simple method to observe grain boundaries in graphene is reported, using ultraviolet irradiation in humid conditions followed by optical microscopy. | | | | | | | | | | | | | | | | | | | | | | | | A roadmap for graphene ▶ | | | | K. S. Novoselov, V. I. Fal′ko, L. Colombo, P. R. Gellert, M. G. Schwab et al. | | | | Graphene’s numerous highly desirable properties mean that it has many possible applications in various technologies and devices; these are reviewed and analysed here. | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | The origin of the terrestrial noble-gas signature ▶ | | | | Svyatoslav S. Shcheka & Hans Keppler | | | | The solubility of argon in lower mantle minerals is shown to be much higher than for xenon, so that the depletion of xenon relative to argon in Earth’s atmosphere can be explained by mantle degassing. | | | | | | | | | | | | | | | | April 2012 intra-oceanic seismicity off Sumatra boosted by the Banda-Aceh megathrust ▶ | | | | Matthias Delescluse, Nicolas Chamot-Rooke, Rodolphe Cattin, Luce Fleitout, Olga Trubienko et al. | | | | The two earthquakes of respective magnitudes 8.6 and 8.2 that occurred off the coast of the Sumatra subduction zone on 11 April 2012 are shown to be part of a continuing boost of the intraplate deformation between India and Australia that followed the Aceh 2004 and Nias 2005 megathrust earthquakes. | | | | | | | | | | | | En échelon and orthogonal fault ruptures of the 11 April 2012 great intraplate earthquakes ▶ | | | | Han Yue, Thorne Lay & Keith D. Koper | | | | The magnitude 8.7 earthquake that occurred off the coast of the Sumatra subduction zone on 11 April 2012 is shown to have had an extraordinarily complex four-fault rupture; these great ruptures represent large lithospheric deformation that may eventually lead to a localized boundary between the Indian and Australian plates. | | | | | | | | | | | | The 11 April 2012 east Indian Ocean earthquake triggered large aftershocks worldwide ▶ | | | | Fred F. Pollitz, Ross S. Stein, Volkan Sevilgen & Roland Bürgmann | | | | Although strong remote aftershocks are exceedingly rare, their rate increased fivefold during the six days following the 2012 east Indian Ocean earthquake, perhaps as a result of the strike-slip nature of the 2012 event or a build up of close-to-failure nucleation sites. | | | | | | | | | | | | Closing yield gaps through nutrient and water management ▶ | | | | Nathaniel D. Mueller, James S. Gerber, Matt Johnston, Deepak K. Ray, Navin Ramankutty et al. | | | | Global yields of major crops are analysed using climate, irrigation and new nutrient data to show that large production increases are possible from closing yield gaps to 100% of attainable yields, and that changes in management practices needed to close yield gaps vary considerably by region and current intensity. | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Cosmology: Out of the darkness ▶ | | | | The 62nd Lindau Nobel Laureate Meeting opened with a talk by Brian Schmidt, who shared the 2011 physics prize for the shocking revelation that the Universe is expanding at an accelerating rate. Fifteen years after Schmidt's initial discovery, the 'dark energy' invoked to explain this cosmic acceleration is still a mystery. | | | | | | | | | | | | Astronomy: A conversation about observation ▶ | | | | In the spirit of the Lindau Meeting, we present a dialogue between a Nobel laureate and a young researcher. This interchange started online, where it continues to unfold. Here is a digest of this conversation, which has developed across time and space. | | | | | | | | | | | | Finding fascination in nature ▶ | | | | Douglas Osheroff is a Stanford University physicist focused on ultralow-temperature physics of quantum fluids and solids. Co-recipient of the 1996 Nobel Prize in Physics for the discovery of superfluidity in helium-3, Osheroff spent much of his childhood performing science experiments — often with an element of danger — that helped hone his technical skills. | | | | | | | | | | | | Coming to terms with the Higgs ▶ | | | | This year's Lindau meeting coincided with the biggest particle-physics discovery in a generation. Theoretical particle physicist Martinus Veltman, emeritus professor at the University of Michigan in Ann Arbor, shared the 1999 Nobel Prize in Physics for his work on the 'standard model' of particle physics — the theory that predicted the Higgs boson. Yet he has spent the past 30 years doubting whether the Higgs exists. | | | | | | | | | | | | In search of ignorance ▶ | | | | William Phillips is a physicist at the National Institute of Standards and Technology in Gaithersburg, Maryland. He was joint winner of the 1997 Nobel Prize in Physics, awarded for the development of laser cooling and trapping methods, and is still beguiled by the lure of the unknown. | | | | | | | | | | | | From Los Alamos to Stockholm ▶ | | | | Roy Glauber shared the Nobel Prize in Physics in 2005. He was cited for his contribution to the quantum theory of optical coherence, which explains why many experiments, using lasers for example, can only be understood if light is explicitly considered to be granular (composed of individual photons). His work laid the foundations of a field now known as quantum optics. | | | | | | | | | | | | Socially responsible science ▶ | | | | The first Mexican-born scientist to become a Nobel laureate in chemistry, Mario Molina shared the 1995 prize for his role in discovering the threat posed by chlorofluorocarbons (CFCs) to Earth's ozone layer. An optimist who passionately pursued science from a young age, Molina now focuses on finding practical solutions to environmental challenges. | | | | | | | | | | | | | | | |
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| | | | | | | | | | | | | | Confronting the Universe - 5 short films on physics At the 2012 Meeting of Nobel Laureates, we filmed five debates on issues that matter to the current generation of researchers. Watch the full series of films including this week's releases 'Beyond the classroom' featuring Harry Kroto and Dudley Herschbach, and 'Betting on the cosmos' featuring Robert Laughlin and David Gross. nature.com/lindau/2012 Supported by Mars, Incorporated and published weekly from Sept 19th - Oct 10th | | | | | | | | | | |
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| | | | | | | | | | | | | | | | Mental health: Under a cloud ▶ | | | | Depression is rife among graduate students and postdocs. Universities are working to get them the help they need. | | | | | | | | | | | | | | | | Advising on the edge ▶ | | | | Interdisciplinary mentorship must evolve to keep pace with innovative programmes, argues Katherine Mackey. | | | | | | | | | | | | | | | | | | | | | | | | Careers related news & comment | | | | | | | | | | | | | | | |
| | | | | |  naturejobs.com Science jobs of the week | | | | | | | | | | | | | | | | | | | | No matter what your career stage, student, postdoc or senior scientist, you will find articles on naturejobs.com to help guide you in your science career. Keep up-to-date with the latest sector trends, vote in our reader poll and sign-up to receive the monthly Naturejobs newsletter. | | | | | | | | | | • Nature events featured events | | | | | | | | | |  natureevents featured events | | | | | | | | | | Nature events is the premier resource for scientists looking for the latest scientific conferences, courses, meetings and symposia. Featured across Nature Publishing Group journals and centrally at natureevents.com it is an essential reference guide to scientific events worldwide. | | | | | |
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