Tuesday, August 21, 2012

Nature Immunology Contents: September 2012 Volume 13 pp 797 - 899

Nature Immunology

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TABLE OF CONTENTS

September 2012 Volume 13, Issue 9

Correspondence
Obituary
Commentary
News and Views
Research Highlights
Review
Articles
Resource

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Correspondence

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Reassessing genomic targeting of AID   pp797 - 798
Marc A Hogenbirk, Arno Velds, Ron M Kerkhoven and Heinz Jacobs
doi:10.1038/ni.2367

See also: Correspondence by Yamane et al.

Reply to "Reassessing genomic targeting of AID"   pp798 - 800
Arito Yamane, Wolfgang Resch, Michel Nussezweig and Rafael Casellas
doi:10.1038/ni.2368

See also: Correspondence by Hogenbirk et al.

Obituary

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Norman Letvin 1949-2012   p801
Andrew James McMichael
doi:10.1038/ni.2399

Commentary

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Technical considerations for functional sequencing assays   pp802 - 807
Weihua Zeng and Ali Mortazavi
doi:10.1038/ni.2407

News and Views

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Tumor immunity times out: TIM-3 and HMGB1   pp808 - 810
Daolin Tang and Michael T Lotze
doi:10.1038/ni.2396
The characteristics of the tumor microenvironment vary widely. New work shows that after tumor-associated expression of the receptor TIM-3 by dendritic cells, TIM-3 inhibits the antitumor efficacy of DNA vaccines and chemotherapy by binding to the damage-associated molecular pattern molecule, HMGB1.

See also: Article by Chiba et al.

A voltage-gated sodium channel mediates positive selection of T cells   pp810 - 812
Bernard Malissen
doi:10.1038/ni.2400
The activation of T cells requires the entry of calcium ions through the plasma membrane. A study now identifies a voltage-gated sodium channel as being essential for the sustained entry of calcium needed for the developmental process of positive selection.

See also: Article by Lo et al.

EPCR: a stress trigger for γδ T cells   pp812 - 814
Deborah A Witherden and Wendy L Havran
doi:10.1038/ni.2398
The mechanism by which γδ T cells are triggered to respond to stress elicited by infection or malignancy has remained a mystery. New data identify endothelial protein C receptor as a stress ligand for γδ T cells that is induced by cytomegalovirus infection.

See also: Article by Willcox et al.

The yin and yang of CD1d recognition   pp814 - 815
Erin J Adams and Adrienne M Luoma
doi:10.1038/ni.2401
Structural studies identify considerable differences in the recognition of CD1d-lipid complexes by the TCRs of type II and type I (invariant) natural killer T cells.

See also: Article by Girardi et al. | Article by Patel et al.

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Research Highlights

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Tolerant mammals | Building an immune synapse | Location dictates function | Family heritage | Allosteric IgE recognition | Local immunity


Review

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C-type lectin receptors orchestrate antifungal immunity   pp817 - 822
Sarah E Hardison and Gordon D Brown
doi:10.1038/ni.2369

Articles

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The innate immune sensor NLRC3 attenuates Toll-like receptor signaling via modification of the signaling adaptor TRAF6 and transcription factor NF-κB   pp823 - 831
Monika Schneider, Albert G Zimmermann, Reid A Roberts, Lu Zhang, Karen V Swanson, Haitao Wen, Beckley K Davis, Irving C Allen, Eda K Holl, Zhengmao Ye, Adeeb H Rahman, Brian J Conti, Timothy K Eitas, Beverly H Koller and Jenny P-Y Ting
doi:10.1038/ni.2378
Sensors of the NLR family generally activate innate immunity. Ting et al., however, demonstrate that the little-known NLRC3 negatively regulates Toll-like receptor signaling by altering ubiquitination of the signaling adaptor TRAF6.

Tumor-infiltrating DCs suppress nucleic acid-mediated innate immune responses through interactions between the receptor TIM-3 and the alarmin HMGB1   pp832 - 842
Shigeki Chiba, Muhammad Baghdadi, Hisaya Akiba, Hironori Yoshiyama, Ichiro Kinoshita, Hirotoshi Dosaka-Akita, Yoichiro Fujioka, Yusuke Ohba, Jacob V Gorman, John D Colgan, Mitsuomi Hirashima, Toshimitsu Uede, Akinori Takaoka, Hideo Yagita and Masahisa Jinushi
doi:10.1038/ni.2376
The receptor TIM-3 was initially identified as a negative regulator of T helper type 1 responses. Jinushi and colleagues now show it has high expression by tumor associated-dendritic cells, in which it perturbs immunogenic recognition of nucleic acids.

See also: News and Views by Tang & Lotze

TGF-β is responsible for NK cell immaturity during ontogeny and increased susceptibility to infection during mouse infancy   pp843 - 850
Jeffrey P Marcoe, James R Lim, Keri L Schaubert, Nassima Fodil-Cornu, Marsel Matka, Alexandra L McCubbrey, Alexander R Farr, Silvia M Vidal and Yasmina Laouar
doi:10.1038/ni.2388
New-born and young mice are more susceptible to viral infections. Laouar and colleagues show this sensitivity is due in part to age-dependent TGF-β-mediated suppression of natural killer cell production.

Type II natural killer T cells use features of both innate-like and conventional T cells to recognize sulfatide self antigens   pp851 - 856
Enrico Girardi, Igor Maricic, Jing Wang, Thien-Thi Mac, Pooja Iyer, Vipin Kumar and Dirk M Zajonc
doi:10.1038/ni.2371
Natural killer T cells (NKT cells) recognize lipid antigens presented by CD1d. Zajonc and Rossjohn and their colleagues describe molecular interactions between type II NKT cell antigen receptors and CD1d-ligand complexes, which demonstrate distinct modes of recognition used by the receptors.

See also: News and Views by Adams & Luoma

Recognition of CD1d-sulfatide mediated by a type II natural killer T cell antigen receptor   pp857 - 863
Onisha Patel, Daniel G Pellicci, Stephanie Gras, Maria L Sandoval-Romero, Adam P Uldrich, Thierry Mallevaey, Andrew J Clarke, Jérôme Le Nours, Alex Theodossis, Susanna L Cardell, Laurent Gapin, Dale I Godfrey and Jamie Rossjohn
doi:10.1038/ni.2372
Natural killer T cells (NKT cells) recognize lipid antigens presented by CD1d. Zajonc and Rossjohn and their colleagues describe molecular interactions between type II NKT cell antigen receptors and CD1d-ligand complexes, which demonstrate distinct modes of recognition used by the receptors.

See also: News and Views by Adams & Luoma

Mouse Hobit is a homolog of the transcriptional repressor Blimp-1 that regulates NKT cell effector differentiation   pp864 - 871
Klaas P J M van Gisbergen, Natasja A M Kragten, Kirsten M L Hertoghs, Felix M Wensveen, Stipan Jonjic, Jörg Hamann, Martijn A Nolte and Rene A W van Lier
doi:10.1038/ni.2393
Van Gisbergen and colleagues report that Hobit, a homolog of the transcription factor Blimp-1, controls the maintenance of mature mouse natural killer T cells and regulates their effector functions in a species-specific way.

Cytomegalovirus and tumor stress surveillance by binding of a human γδ T cell antigen receptor to endothelial protein C receptor   pp872 - 879
Carrie R Willcox, Vincent Pitard, Sonia Netzer, Lionel Couzi, Mahboob Salim, Tobias Silberzahn, Jean-François Moreau, Adrian C Hayday, Benjamin E Willcox and Julie Déchanet-Merville
doi:10.1038/ni.2394
How γδ T cells 'see' antigen is poorly defined. Dechanet-Merville and colleagues demonstrate that a subset of γδ T cells functionally recognize the stress-associated self molecule EPCR on both virus-infected and transformed cells.

See also: News and Views by Witherden & Havran

A voltage-gated sodium channel is essential for the positive selection of CD4+ T cells   pp880 - 887
Wan-Lin Lo, David L Donermeyer and Paul M Allen
doi:10.1038/ni.2379
Calcium signals are required for thymocyte positive selection. Allen and colleagues show that thymic selecting ligands induce SCN5a-SCN4b voltage-gated sodium channels and sustained calcium influx necessary for CD4+ selection.

See also: News and Views by Malissen

Resource

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Deciphering the transcriptional network of the dendritic cell lineage   pp888 - 899
Jennifer C Miller, Brian D Brown, Tal Shay, Emmanuel L Gautier, Vladimir Jojic, Ariella Cohain, Gaurav Pandey, Marylene Leboeuf, Kutlu G Elpek, Julie Helft, Daigo Hashimoto, Andrew Chow, Jeremy Price, Melanie Greter, Milena Bogunovic, Angelique Bellemare-Pelletier, Paul S Frenette, Gwendalyn J Randolph, Shannon J Turley, Miriam Merad and the Immunological Genome Consortium
doi:10.1038/ni.2370
The transcriptional regulation of commitment to the dendritic cell (DC) lineage and functional specialization of DCs in vivo is poorly understood. In this Resource, Merad and colleagues identify the lineage relationships among various tissue DC subsets.

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