Wednesday, August 29, 2012

Nature contents: 30 August 2012

 
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 Volume 488 Number 7413  
 

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 News & Comment  Biological Sciences  Chemical Sciences
 
 Physical Sciences  Earth & Environmental Sciences  Careers & Jobs
 
 
 

This week's highlights

 
 

Specials - Outlook: Human papillomavirus

 
 

It is tempting to characterize the human papillomavirus (HPV) story as a triumph of science. It might have taken 30 years from identification of HPV as the cause of cervical cancer to the first vaccine reaching the market, but there is still much to understand about HPV biology and an urgent need to improve on existing vaccines and diagnostic tests. The story of HPV is still being written.

more

 
 
 

Physical Sciences

More Physical sciences
 
X-ray and optical wave mixing
 

Mixing X-rays and optical waves was proposed as an atomic-scale probe of optical interactions nearly 50 years ago, but has been difficult to achieve due to a lack of sufficiently strong X-ray sources. Now, with the advent of free electron lasers, a team working with the Linac Coherent Light Source, has achieved X-ray and optical mixing in diamond. The new capability should make it possible to observe light's interactions with matter at the atomic scale and enable direct visualization of the making and breaking of chemical bonds.

 
 
 

Earth & Environmental Sciences

More Earth & Environmental sciences
 
An index to assess the health and benefits of the global ocean
 

Global ocean policy strives for 'healthy oceans', but we have no tool to actually measure ocean health. To fill this gap Benjamin Halpern and colleagues have developed an ocean health index to assess the many factors that contribute to the state of the oceans. Scores were determined for all coastal nations, and the global score is 60 out of 100. Many African and Asian countries score poorly. This new index should allow for quick identification of strategic actions to improve overall ocean health to the benefit of Earth's ecosystems and their ability to provide benefits to society.

 
 
 
 
 
 
 
  
 
 

Nature Insight: Chemistry and Energy
This Insight focuses on the developments in solar energy, water-based methods of electricity generation and the production of biofuels.
Access the Insight free online for two months.
Produced with support from: TOTAL

 
 
 
 
 
 
 
 

Biological Sciences

More Biological sciences
 
Antibiotics in early life alter the murine colonic microbiome and adiposity
 

Continuous treatment with low levels of antibiotics has been used to enhance body weight in livestock for decades, yet the mechanisms for this effect are unclear. Using a similar approach in young mice it is now shown that subtherapeutic doses of antibiotics increase the body's fat mass, cause changes in the composition of the intestinal microbial community and modify microbial metabolic pathways, leading to short-chain fatty acid production. These findings highlight the role of microbes in maintaining normal metabolic activity.

 
 
 

Podcast & Video

 
 

In this week's podcast: horses with unusual walks, dieting monkeys, and anti-science violence in Mexico.

 
 
 
 
News & CommentRead daily news coveragetop
 
 
 
 
 
 

THIS WEEK

 
 
 
 
 

Editorial

 
   
 
 
 
 
 

Open for business ▶

 
 

If Europe is to achieve the science-investment goals it set for the decade, it must make life easier for researchers coming from abroad.

 
 
 
 
 
 

Small steps ▶

 
 

Violent opposition to nanotechnology should be countered with public awareness.

 
 
 
 
 
 

World View

 
   
 
 
 
 
 

What matters for science is who runs the country ▶

 
 

A chief scientific adviser is no substitute for a ruling elite that is actually engaged with science and engineering, argues Colin Macilwain.

 
 
 
 
 
 

Seven Days

 
   
 
 
 
 
 

Seven days: 24–30 August 2012 ▶

 
 

The week in science: Eulogies for Neil Armstrong; more disappointing trial results for Alzheimer's drugs; and China's plans for telescopes in the Antarctic.

 
 
 
 
 

NEWS IN FOCUS

 
 
 
 
 

Pig fever sweeps across Russia ▶

 
 

Deadly virus may be poised to spread to neighbouring states.

 
 
 
 
 
 

US colliders jostle for funds ▶

 
 

Heavy-ion facility at risk of premature closure as committee sets budget priorities.

 
 
 
 
 
 

Doctors back circumcision ▶

 
 

US task force finds that public-health benefits of the procedure outweigh risks to individuals.

 
 
 
 
 
 

Calorie restriction falters in the long run ▶

 
 

Genetics and healthy diets matter more for longevity.

 
 
 
 
 
 

Brazil unveils tool to track emissions ▶

 
 

Carbon releases lag behind Amazon deforestation.

 
 
 
 
 
 

Recycled dishes form telescope network ▶

 
 

Africa refits redundant satellite dishes for radio astronomy.

 
 
 
 
 
 

Features

 
   
 
 
 
 
 

After the Higgs: The new particle landscape ▶

 
 

Physicists are planning the powerful accelerators they will need to study the Higgs boson and its interactions in detail.

 
 
 
 
 
 

Nanotechnology: Armed resistance ▶

 
 

Nature assesses the aftermath of a series of nanotechnology-lab bombings in Mexico — and asks how the country became a target of eco-anarchists.

 
 
 
 
 

COMMENT

 
 
 
 
 

Particle physics: Beyond the Higgs ▶

 
 

The Higgs boson is not the end of the story. There is more to map in the new world of extreme physics, says Jon Butterworth.

 
 
 
 
 
 

Climate science: Time to raft up ▶

 
 

Climate scientists should learn from the naysayers and pull together to get their message across, says Chris Rapley.

 
 
 
 
 
 

Books and Arts

 
   
 
 
 
 
 

History: Darwin the eroticist ▶

 
 

William Bynum applauds a life of physician and scientific poet Erasmus Darwin, Charles's intriguing grandfather.

 
 
 
 
 
 

Books in brief ▶

 
 
 
 
 
 

Neuroscience: The ears have it ▶

 
 

Andrew King enjoys a personal account of the impact of sound on life, evolution and the brain.

 
 
 
 
 
 

Q&A: Species futurologist ▶

 
 

Media artist Jon McCormack uses computer algorithms to imagine the future of native Australian species. As he prepares two new works — Codeform and Fifty Sisters — for the Ars Electronica Festival in Linz, Austria, he talks about digital evolution and virtual ecosystems.

 
 
 
 
 
 

Correspondence

 
   
 
 
 
 
 

Gender matters: A call to commission more women writers Daniel Conley & Johanna Stadmark | Competing interests: Expanding rapidly Arleen B. Rifkind | Competing interests: Judged in perpetuity Thomas C. Erren | Australia: Biomass energy holds big promise Andrew Lang, Heinz Kopetz & Albert Parker | Publishing: Curb temptation to skip quality control Herman Tse | Research fraud: Speed up reviews of misconduct Jelte M. Wicherts & Marcel A. L. M. van Assen | Careers: PhDs fit for industry and commerce, too Michael Mulvany & Zdravko Lackovic | Atmospheric science: Institute to continue climate monitoring Olaf Morgenstern, Richard McKenzie & Vanessa Sherlock | Communication: Embrace complexity but not jargon Anita Makri

 
 
 
 
 

Obituary

 
   
 
 
 
 
 

Bernard Lovell (1913–2012) ▶

 
 

Physicist and radar pioneer who created the famous Jodrell Bank radio telescope.

 
 
 
 
 
 

Correction

 
   
 
 
 
 
 

Correction ▶

 
 
 
 
 
 
 
 
 
 
  
 
 
 
 
 
 
Biological Sciencestop
 
 
 
 
 
 

RESEARCH

 
 
 
 
 

Latest Online

 
   
 
 
 
 
 

Ageing: Mixed results for dieting monkeys ▶

 
 

Steven N. Austad

 
 
 
 
 
 

Structural and genetic basis for development of broadly neutralizing influenza antibodies ▶

 
 

Daniel Lingwood, Patrick M. McTamney, Hadi M. Yassine, James R. R. Whittle, Xiaoti Guo et al.

 
 

The events leading to the generation of broadly neutralizing antibodies to influenza viruses, which may hold the key to developing a universal flu vaccine, are elucidated.

 
 
 
 
 
 

Impact of caloric restriction on health and survival in rhesus monkeys from the NIA study ▶

 
 

Julie A. Mattison, George S. Roth, T. Mark Beasley, Edward M. Tilmont, April M. Handy et al.

 
 

The results of a 23-year study of caloric restriction in rhesus macaques are reported; restricted caloric intake did not increase survival, but improved the metabolic profile of monkeys started at older ages and showed a trend towards delaying age-associated disease in monkeys started at a young age.

 
 
 
 
 
 

RPN-6 determines C. elegans longevity under proteotoxic stress conditions ▶

 
 

David Vilchez, Ianessa Morantte, Zheng Liu, Peter M. Douglas, Carsten Merkwirth et al.

 
 

This study shows that nematodes without a germ line re-allocate resources to the soma, resulting in elevated proteasome activity, clearance of damaged proteins and increased longevity; this activity is associated with the increased expression of rpn-6 mediated by the transcription factor DAF-16.

 
 
 
 
 
 

Activity in motor–sensory projections reveals distributed coding in somatosensation ▶

 
 

Leopoldo Petreanu, Diego A. Gutnisky, Daniel Huber, Ning-long Xu, Dan H. O’Connor et al.

 
 

Imaging of activity in long-range axons is reported in mice performing tactile object-localization with their whiskers; the feedback projection from the motor cortex to the somatosensory cortex provides information to integrate whisker movement information and touch, which are key components of object identification.

 
 
 
 
 
 

Genotoxic consequences of endogenous aldehydes on mouse haematopoietic stem cell function ▶

 
 

Juan I. Garaycoechea, Gerry P. Crossan, Frederic Langevin, Maria Daly, Mark J. Arends et al.

 
 

The function of haematopoietic stem and progenitor cells is impaired by damaged DNA; here, endogenously generated aldehydes are found to be one source of such damage, which is repaired by the Fanconi anaemia pathway.

 
 
 
 
 
 

Structure of the haptoglobin–haemoglobin complex ▶

 
 

Christian Brix Folsted Andersen, Morten Torvund-Jensen, Marianne Jensby Nielsen, Cristiano Luis Pinto de Oliveira, Hans-Petter Hersleth et al.

 
 

This study reports the crystal structure of porcine haptoglobin in complex with haemoglobin at 2.9 Å resolution; this provides a structural basis of haptoglobin-mediated recognition of haemoglobin, and insight into the protective role of haptoglobin at the atomic level.

 
 
 
 
 
 

Paramutation in Drosophila linked to emergence of a piRNA-producing locus ▶

 
 

Augustin de Vanssay, Anne-Laure Bougé, Antoine Boivin, Catherine Hermant, Laure Teysset et al.

 
 

A paramutation occurs between two alleles in the same locus, when one allele induces a heritable mutation in another allele without modifying the DNA sequence; now, in Drosophila, a paramutation is shown to be transmissible over generations.

 
 
 
 
 
 

Articles and Letters

 
   
 
 
 
 
 

Antibiotics in early life alter the murine colonic microbiome and adiposity ▶

 
 

Ilseung Cho, Shingo Yamanishi, Laura Cox, Barbara A. Methé, Jiri Zavadil et al.

 
 

Treatment of young mice with low levels of antibiotics results in increases in adiposity and causes both a change in the composition of the intestinal microbial community and an alteration in the activity of microbial metabolic pathways, leading to increased short-chain fatty acid production.

 
 
 
 
 
 

Potential methane reservoirs beneath Antarctica ▶

 
 

J. L. Wadham, S. Arndt, S. Tulaczyk, M. Stibal, M. Tranter et al.

 
 

On the basis of data from other subglacial environments and simulations of the accumulation of methane hydrate in Antarctic sedimentary basins, it seems there could be unsuspected, large stores of methane beneath the Antarctic Ice Sheet.

 
 
 
 
 
 

Mutations in DMRT3 affect locomotion in horses and spinal circuit function in mice  OPEN ▶

 
 

Lisa S. Andersson, Martin Larhammar, Fatima Memic, Hanna Wootz, Doreen Schwochow et al.

 
 

A premature stop codon in the DMRT3 gene has a major effect on the pattern of locomotion in horses, and the Dmrt3 transcription factor is critical in the development of a coordinated locomotor network in mice, suggesting that it has an important role in configuring the spinal circuits that control stride.

 
 
 
 
 
 

Autistic-like behaviour and cerebellar dysfunction in Purkinje cell Tsc1 mutant mice ▶

 
 

Peter T. Tsai, Court Hull, YunXiang Chu, Emily Greene-Colozzi, Abbey R. Sadowski et al.

 
 

Both heterozygous loss and homozygous loss of Tsc1 in mouse cerebellar Purkinje cells (PCs) result in autistic-like behaviours, which can be prevented by treatment with the mTOR inhibitor, rapamycin; these findings demonstrate critical roles for PCs in autistic-like behaviours in mice.

 
 
 
 
 
 

Early-stage epigenetic modification during somatic cell reprogramming by Parp1 and Tet2 ▶

 
 

Claudia A. Doege, Keiichi Inoue, Toru Yamashita, David B. Rhee, Skylar Travis et al.

 
 

Parp1 and Tet2 mediate essential epigenetic remodelling events in an early phase of induced pluripotent stem cell reprogramming, thus directing subsequent induction of the pluripotency loci.

 
 
 
 
 
 

IDH1(R132H) mutation increases murine haematopoietic progenitors and alters epigenetics ▶

 
 

Masato Sasaki, Christiane B. Knobbe, Joshua C. Munger, Evan F. Lind, Dirk Brenner et al.

 
 

Mutations in isocitrate dehydrogenases IDH1 and IDH2 are common in human gliomas and acute myeloid leukaemias; here, mice that carry the IDH1(R132H) mutation are described, in a new model that should help in investigating the links between mutant IDH1 and leukaemia.

 
 
 
 
 
 

Recurrent R-spondin fusions in colon cancer  OPEN ▶

 
 

Somasekar Seshagiri, Eric W. Stawiski, Steffen Durinck, Zora Modrusan, Elaine E. Storm et al.

 
 

Exomes, transcriptomes and copy-number alterations in a sample of more than 70 primary human colonic tumours were analysed in an attempt to characterize the genomic landscape; in addition to finding alterations in genes associated with commonly mutated signalling pathways, recurrent gene fusions involving R-spondin family members were also found to occur in approximately 10% of colonic tumours, revealing a potential new therapeutic target.

 
 
 
 
 
 

Tumour suppressor RNF43 is a stem-cell E3 ligase that induces endocytosis of Wnt receptors ▶

 
 

Bon-Kyoung Koo, Maureen Spit, Ingrid Jordens, Teck Y. Low, Daniel E. Stange et al.

 
 

In vivo and in vitro studies show that the stem-cell E3 ubiquitin ligases RNF43 and ZNRF3 act as tumour suppressors in colorectal cancer models, and are involved in the negative regulation of the cancer-associated Wnt signalling pathway through limiting the cell-surface expression of Wnt receptors.

 
 
 
 
 
 

Novel role of PKR in inflammasome activation and HMGB1 release ▶

 
 

Ben Lu, Takahisa Nakamura, Karen Inouye, Jianhua Li, Yiting Tang et al.

 
 

Double-stranded RNA-dependent protein kinase (PKR) is shown to be a key regulator of the inflammasome; PKR is central for caspase-1 activation and the release of interleukin (IL)-1β, IL-18 and high-mobility group box 1 (HMGB1) in response to a diverse range of stimuli.

 
 
 
 
 
 

T cells become licensed in the lung to enter the central nervous system ▶

 
 

Francesca Odoardi, Christopher Sie, Kristina Streyl, Vijay K. Ulaganathan, Christian Schläger et al.

 
 

A Lewis rat model of experimental autoimmune encephalomyelitis is used to show that on their way to the CNS, encephalitogenic T-cell blasts are temporarily resident in the lung, where they reprogram their gene-expression profile and functional properties to enable them to transgress the blood–brain barrier into the CNS.

 
 
 
 
 
 

The prokaryote messenger c-di-GMP triggers stalk cell differentiation in Dictyostelium ▶

 
 

Zhi-hui Chen & Pauline Schaap

 
 

The prokaryote signalling intermediate cyclic di-(3′:5′)-guanosine monophosphate is shown to be the morphogen responsible for stalk cell differentiation and, thus, the transition from slug migration to fructification in the amoeba Dictyostelium discoideum.

 
 
 
 
 
 

News & Views

 
   
 
 
 
 
 

Immunology: Licensed in the lungs ▶

 
 

Richard M. Ransohoff

 
 
 
 
 
 

Epigenetics: Actors in the cell reprogramming drama ▶

 
 

Kyle M. Loh & Bing Lim

 
 
 
 
 
 

Microbiology: Antibiotics and adiposity ▶

 
 

Harry J. Flint

 
 
 
 
 
 

Ageing: Mixed results for dieting monkeys ▶

 
 

Steven N. Austad

 
 
 
 
 
 

Brief Communications Arising

 
   
 
 
 
 
 

Is irisin a human exercise gene? ▶

 
 

James A. Timmons, Keith Baar, Peter K. Davidsen & Philip J. Atherton

 
 
 
 
 
 

Boström et al. reply ▶

 
 

Pontus Boström, Jun Wu, Mark P. Jedrychowski, Anisha Korde, Li Ye et al.

 
 
 
 
 
 

Corrigenda

 
   
 
 
 
 
 

Corrigendum: Inhibitory receptors bind ANGPTLs and support blood stem cells and leukaemia development ▶

 
 

Junke Zheng, Masato Umikawa, Changhao Cui, Jiyuan Li, Xiaoli Chen et al.

 
 
 
 
 
 

Corrigendum: Atomic model of the type III secretion system needle ▶

 
 

Antoine Loquet, Nikolaos G. Sgourakis, Rashmi Gupta, Karin Giller, Dietmar Riedel et al.

 
 
 
 
 
 

Research Highlights

 
   
 
 
 
 
 

Microbiology: Infection breaks truce | Cancer: Antitumour metabolism | Neurodevelopment: Low-flow blood-vessel pruning | Epigenetics: Clues from baby blood spots | Medical devices: Smart way to seal cuts | Palaeontology: Jagged jaws identify mollusc | Evolution: Rodent that cannot gnaw | Ecology: Equations in papers=fewer citations

 
 
 
 

NEWS & COMMENT

 
 
 
 
 

Pig fever sweeps across Russia | Doctors back circumcision | Calorie restriction falters in the long run | Brazil unveils tool to track emissions | Nanotechnology: Armed resistance | History: Darwin the eroticist | Books in brief | Neuroscience: The ears have it | Q&A: Species futurologist | Australia: Biomass energy holds big promise Andrew Lang, Heinz Kopetz & Albert Parker

 
 
 
 
 
 

More Biological Sciences ▶

 
 
 
 
 
 
 
 
 
 
 
 

Nature Special: Human Microbiota
The human body is colonized by a vast number of microbes, collectively referred to as the human microbiota. The link between these microbes and our health is the focus of a growing number of research initiatives and new insights are emerging rapidly.
Access selected content free online for six months.

Produced with support from: MO BIO Laboratories

 
 
 
 
 
 
 
Chemical Sciencestop
 
 
 
 
 
 

RESEARCH

 
 
 
 
 

Latest Online

 
   
 
 
 
 
 

Structure of the haptoglobin–haemoglobin complex ▶

 
 

Christian Brix Folsted Andersen, Morten Torvund-Jensen, Marianne Jensby Nielsen, Cristiano Luis Pinto de Oliveira, Hans-Petter Hersleth et al.

 
 

This study reports the crystal structure of porcine haptoglobin in complex with haemoglobin at 2.9 Å resolution; this provides a structural basis of haptoglobin-mediated recognition of haemoglobin, and insight into the protective role of haptoglobin at the atomic level.

 
 
 
 
 
 

Brief Communications Arising

 
   
 
 
 
 
 

Is irisin a human exercise gene? ▶

 
 

James A. Timmons, Keith Baar, Peter K. Davidsen & Philip J. Atherton

 
 
 
 
 
 

Boström et al. reply ▶

 
 

Pontus Boström, Jun Wu, Mark P. Jedrychowski, Anisha Korde, Li Ye et al.

 
 
 
 
 
 

Research Highlights

 
   
 
 
 
 
 

Cancer: Antitumour metabolism

 
 
 
 

NEWS & COMMENT

 
 
 
 
 

Books in brief

 
 
 
 
 
 

More Chemical Sciences ▶

 
 
 
 
 
 
 
Physical Sciencestop
 
 
 
 
 
 

RESEARCH

 
 
 
 
 

Latest Online

 
   
 
 
 
 
 

Activation of old carbon by erosion of coastal and subsea permafrost in Arctic Siberia ▶

 
 

J. E. Vonk, L. Sánchez-García, B. E. van Dongen, V. Alling, D. Kosmach et al.

 
 

Extensive release of carbon from coastal permafrost is found to dominate the sedimentary carbon budget of the world’s largest continental shelf, with about two-thirds of this old carbon escaping to the atmosphere as carbon dioxide.

 
 
 
 
 
 

Articles and Letters

 
   
 
 
 
 
 

X-ray and optical wave mixing ▶

 
 

T. E. Glover, D. M. Fritz, M. Cammarata, T. K. Allison, Sinisa Coh et al.

 
 

A free-electron laser provides a sufficiently intense source of X-rays to allow X-ray and optical wave mixing, here demonstrated by measuring the induced charge density and associated microscopic fields in single-crystal diamond.

 
 
 
 
 
 

A Cenozoic record of the equatorial Pacific carbonate compensation depth ▶

 
 

Heiko Pälike, Mitchell W. Lyle, Hiroshi Nishi, Isabella Raffi, Andy Ridgwell et al.

 
 

A detailed reconstruction of the calcium carbonate compensation depth—at which calcium carbonate is dissolved—in the equatorial Pacific Ocean over the past 53 million years shows that it tracks ocean cooling, increasing as the ocean cools.

 
 
 
 
 
 

Potential methane reservoirs beneath Antarctica ▶

 
 

J. L. Wadham, S. Arndt, S. Tulaczyk, M. Stibal, M. Tranter et al.

 
 

On the basis of data from other subglacial environments and simulations of the accumulation of methane hydrate in Antarctic sedimentary basins, it seems there could be unsuspected, large stores of methane beneath the Antarctic Ice Sheet.

 
 
 
 
 
 

‘Melt welt’ mechanism of extreme weakening of gabbro at seismic slip rates ▶

 
 

Kevin M. Brown & Yuri Fialko

 
 

A laboratory study of the frictional properties of the igneous rock gabbro at seismically relevant slip rates suggests that the initial weakening of a fault surface during earthquake rupture may be associated with hotspots and macroscopic streaks of melt, which partially unload the rest of the slip interface.

 
 
 
 
 
 

Graphene and boron nitride lateral heterostructures for atomically thin circuitry ▶

 
 

Mark P. Levendorf, Cheol-Joo Kim, Lola Brown, Pinshane Y.Huang et al.

 
 

This versatile and scalable 'patterned regrowth' fabrication process produces one-atom-thick sheets containing lateral junctions between electrically conductive graphene and insulating hexagonal boron nitride, paving the way for flexible, transparent electronic device films.

 
 
 
 
 
 

News & Views

 
   
 
 
 
 
 

Ocean science: Ancient burial at sea ▶

 
 

Heather Stoll

 
 
 
 
 
 

Optics: Mixing waves in a diamond ▶

 
 

Nina Rohringer

 
 
 
 
 
 

Astronomy: Collision course ▶

 
 

R. Brent Tully

 
 
 
 
 
 

Corrigendum

 
   
 
 
 
 
 

Corrigendum: The age of the Milky Way inner halo ▶

 
 

Jason S. Kalirai

 
 
 
 
 
 

Research Highlights

 
   
 
 
 
 
 

Nanotechnology: Strong and stable nanocrystals | Medical devices: Smart way to seal cuts

 
 
 
 

NEWS & COMMENT

 
 
 
 
 

Small steps | US colliders jostle for funds | Recycled dishes form telescope network | After the Higgs: The new particle landscape | Nanotechnology: Armed resistance | Particle physics: Beyond the Higgs | Climate science: Time to raft up | Books in brief | Neuroscience: The ears have it | Q&A: Species futurologist | Atmospheric science: Institute to continue climate monitoring Olaf Morgenstern, Richard McKenzie & Vanessa Sherlock | Bernard Lovell (1913–2012)

 
 
 
 
 
 

More Physical Sciences ▶

 
 
 
 
 
 
 
Earth & Environmental Sciencestop
 
 
 
 
 
 

RESEARCH

 
 
 
 
 

Latest Online

 
   
 
 
 
 
 

Activation of old carbon by erosion of coastal and subsea permafrost in Arctic Siberia ▶

 
 

J. E. Vonk, L. Sánchez-García, B. E. van Dongen, V. Alling, D. Kosmach et al.

 
 

Extensive release of carbon from coastal permafrost is found to dominate the sedimentary carbon budget of the world’s largest continental shelf, with about two-thirds of this old carbon escaping to the atmosphere as carbon dioxide.

 
 
 
 
 
 

Closing yield gaps through nutrient and water management ▶

 
 

Nathaniel D. Mueller, James S. Gerber, Matt Johnston, Deepak K. Ray, Navin Ramankutty et al.

 
 

Global yields of major crops are analysed using climate, irrigation and new nutrient data to show that large production increases are possible from closing yield gaps to 100% of attainable yields, and that changes in management practices needed to close yield gaps vary considerably by region and current intensity.

 
 
 
 
 
 

Articles and Letters

 
   
 
 
 
 
 

A Cenozoic record of the equatorial Pacific carbonate compensation depth ▶

 
 

Heiko Pälike, Mitchell W. Lyle, Hiroshi Nishi, Isabella Raffi, Andy Ridgwell et al.

 
 

A detailed reconstruction of the calcium carbonate compensation depth—at which calcium carbonate is dissolved—in the equatorial Pacific Ocean over the past 53 million years shows that it tracks ocean cooling, increasing as the ocean cools.

 
 
 
 
 
 

An index to assess the health and benefits of the global ocean ▶

 
 

Benjamin S. Halpern, Catherine Longo, Darren Hardy, Karen L. McLeod, Jameal F. Samhouri et al.

 
 

This study develops a wide-ranging index to assess the many factors that contribute to the health and benefits of the oceans, and the scores for all costal nations are assessed.

 
 
 
 
 
 

Potential methane reservoirs beneath Antarctica ▶

 
 

J. L. Wadham, S. Arndt, S. Tulaczyk, M. Stibal, M. Tranter et al.

 
 

On the basis of data from other subglacial environments and simulations of the accumulation of methane hydrate in Antarctic sedimentary basins, it seems there could be unsuspected, large stores of methane beneath the Antarctic Ice Sheet.

 
 
 
 
 
 

‘Melt welt’ mechanism of extreme weakening of gabbro at seismic slip rates ▶

 
 

Kevin M. Brown & Yuri Fialko

 
 

A laboratory study of the frictional properties of the igneous rock gabbro at seismically relevant slip rates suggests that the initial weakening of a fault surface during earthquake rupture may be associated with hotspots and macroscopic streaks of melt, which partially unload the rest of the slip interface.

 
 
 
 
 
 

News & Views

 
   
 
 
 
 
 

Environmental science: Scorecard for the seas ▶

 
 

Derek P. Tittensor

 
 
 
 
 
 

Ocean science: Ancient burial at sea ▶

 
 

Heather Stoll

 
 
 
 
 

NEWS & COMMENT

 
 
 
 
 

Brazil unveils tool to track emissions | Recycled dishes form telescope network | Climate science: Time to raft up | Books in brief | Australia: Biomass energy holds big promise Andrew Lang, Heinz Kopetz & Albert Parker | Atmospheric science: Institute to continue climate monitoring Olaf Morgenstern, Richard McKenzie & Vanessa Sherlock

 
 
 
 
 
 

More Earth & Environmental Sciences ▶

 
 
 
 
 
 
 
Specials - Nature Outlook: Human PapillomavirusFree Accesstop
 
 
 
 
 
 
 

Human papillomavirus ▶

 
 

Herb Brody 

 
 
 
 
 
 

HPV: The global burden ▶

 
 

Human papillomavirus (HPV) has become synonymous with cervical cancer, but its actual footprint is much bigger, by James Mitchell Crow. 

 
 
 
 
 
 

Clinical approval: Trials of an anticancer jab ▶

 
 

Two vaccines seem to be so effective in preventing HPV infection that mass vaccination has been introduced for girls. But will long-term studies show falls in cervical cancer? 

 
 
 
 
 
 

Vaccination: A durable design ▶

 
 

Vaccines on the market aren't practical for the developing world — where cervical cancer hits hardest — but researchers are trying to make ones that are. 

 
 
 
 
 
 

Screening: Testing times ▶

 
 

Pap tests have been a mainstay of cervical cancer screening, but new tests, vaccines and knowledge might be changing that, including when and how frequently to test. 

 
 
 
 
 
 

Perspective: Vaccinate boys too ▶

 
 

HPV-associated cancers in men are on the rise. By not vaccinating boys we are failing to gain maximum health benefit, argues Margaret Stanley. 

 
 
 
 
 
 

Public health: Prevention comes of age ▶

 
 

Sub-Saharan countries lag behind in screening and treatment for human papillomavirus. But national efforts and the introduction of low-tech methods could change that. 

 
 
 
 
 
 

Pathology: Three questions ▶

 
 

Linking specific types of HPV with cervical cancer and developing effective vaccines against should be celebrated. But there are gaps in our understanding of these viruses and how they cause disease. 

 
 
 
 
 
 

Q&A: On the case ▶

 
 

A Nobel prizewinner for pinning cervical cancer on human papillomavirus, Harald zur Hausen still investigates viruses. Nature Outlook talks to the medical doctor–turned–virologist about other possible culprits. 

 
 
 
 

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Careers & Jobstop
 
 
 
 
 
 
 

Job satisfaction: Turbulent times ▶

 
 

Nature's 2012 Salary and Satisfaction Survey suggests that many scientists are content with their work, but uneasy about finances.

 
 
 
   
 
 
 

Careers related news & comment

 
   
 
 
 
 
 

Open for business | Small steps | What matters for science is who runs the country | After the Higgs: The new particle landscape | Nanotechnology: Armed resistance | Gender matters: A call to commission more women writers Daniel Conley & Johanna Stadmark | Competing interests: Expanding rapidly Arleen B. Rifkind | Competing interests: Judged in perpetuity Thomas C. Erren | Publishing: Curb temptation to skip quality control Herman Tse | Careers: PhDs fit for industry and commerce, too Michael Mulvany & Zdravko Lackovic | Atmospheric science: Institute to continue climate monitoring Olaf Morgenstern, Richard McKenzie & Vanessa Sherlock

 
 
 
 
 
 

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Research associate(Magnetic Nanoparticle Mediated gene Delivery)

 
 

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Associate or Full Professor in Molecular Biology

 
 

Princeton University 

 
 
 
 
 

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Nature events is the premier resource for scientists looking for the latest scientific conferences, courses, meetings and symposia. Featured across Nature Publishing Group journals and centrally at natureevents.com it is an essential reference guide to scientific events worldwide.

 
 
 
 
 
 
 

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