Tuesday, April 17, 2012

The ISME Journal - Table of Contents alert Volume 6 Issue 5

TABLE OF CONTENTS

Volume 6, Issue 5 (May 2012)

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Original Articles

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Original Articles

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MICROBIAL POPULATION AND COMMUNITY ECOLOGY

Contrasting patterns of niche partitioning between two anaerobic terminal oxidizers of organic matter

Brian B Oakley, Franck Carbonero, Scot E Dowd, Robert J Hawkins and Kevin J Purdy

ISME J 2012 6: 905-914; advance online publication, November 24, 2011; 10.1038/ismej.2011.165

Abstract | Full Text

Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome

David T Pride, Julia Salzman, Matthew Haynes, Forest Rohwer, Clara Davis-Long, Richard A White, III, Peter Loomer, Gary C Armitage and David A Relman

ISME J 2012 6: 915-926; advance online publication, December 8, 2011; 10.1038/ismej.2011.169

Abstract | Full Text

MICROBE-MICROBE AND MICROBE-HOST INTERACTIONS

Resource partitioning in relation to cohabitation of Lactobacillus species in the mouse forestomach

Gerald W Tannock, Charlotte M Wilson, Diane Loach, Gregory M Cook, Jocelyn Eason, Paul W O'Toole, Grietje Holtrop and Blair Lawley

ISME J 2012 6: 927-938; advance online publication, November 17, 2011; 10.1038/ismej.2011.161

Abstract | Full Text

Bacterial cis-2-unsaturated fatty acids found in the cystic fibrosis airway modulate virulence and persistence of Pseudomonas aeruginosa

Kate B Twomey, Oisin J O'Connell, Yvonne McCarthy, J Maxwell Dow, George A O'Toole, Barry J Plant and Robert P Ryan

ISME J 2012 6: 939-950; advance online publication, December 1, 2011; 10.1038/ismej.2011.167

Abstract | Full Text

Denitrification likely catalyzed by endobionts in an allogromiid foraminifer

Joan M Bernhard, Virginia P Edgcomb, Karen L Casciotti, Matthew R McIlvin and David J Beaudoin

ISME J 2012 6: 951-960; advance online publication, December 1, 2011; 10.1038/ismej.2011.171

Abstract | Full Text

EVOLUTIONARY GENETICS

Contrasting recombination patterns and demographic histories of the plant pathogen Ralstonia solanacearum inferred from MLSA

Emmanuel Wicker, Pierre Lefeuvre, Jean-Charles de Cambiaire, Christophe Lemaire, Stéphane Poussier and Philippe Prior

ISME J 2012 6: 961-974; advance online publication, November 17, 2011; 10.1038/ismej.2011.160

Abstract | Full Text

Laboratory evolution of Geobacter sulfurreducens for enhanced growth on lactate via a single-base-pair substitution in a transcriptional regulator

Zarath M Summers, Toshiyuki Ueki, Wael Ismail, Shelley A Haveman and Derek R Lovley

ISME J 2012 6: 975-983; advance online publication, November 24, 2011; 10.1038/ismej.2011.166

Abstract | Full Text

GEOMICROBIOLOGY AND MICROBIAL CONTRIBUTIONS TO GEOCHEMICAL CYCLES

Magnitude and regulation of bacterioplankton respiratory quotient across freshwater environmental gradients

Martin Berggren, Jean-François Lapierre and Paul A del Giorgio

ISME J 2012 6: 984-993; advance online publication, November 17, 2011; 10.1038/ismej.2011.157

Abstract | Full Text

MICROBIAL ECOLOGY AND FUNCTIONAL DIVERSITY OF NATURAL HABITATS

Ecological determinants of the occurrence and dynamics of Vibrio parahaemolyticus in offshore areas

Jaime Martinez-Urtaza, Veronica Blanco-Abad, Alba Rodriguez-Castro, Juan Ansede-Bermejo, Ana Miranda and M Xose Rodriguez-Alvarez

ISME J 2012 6: 994-1006; advance online publication, November 17, 2011; 10.1038/ismej.2011.156

Abstract | Full Text

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

Noah Fierer, Christian L Lauber, Kelly S Ramirez, Jesse Zaneveld, Mark A Bradford and Rob Knight

ISME J 2012 6: 1007-1017; advance online publication, December 1, 2011; 10.1038/ismej.2011.159

Abstract | Full Text

Anaerobic oxidation of methane at different temperature regimes in Guaymas Basin hydrothermal sediments

Jennifer F Biddle, Zena Cardman, Howard Mendlovitz, Daniel B Albert, Karen G Lloyd, Antje Boetius and Andreas Teske

ISME J 2012 6: 1018-1031; advance online publication, November 17, 2011; 10.1038/ismej.2011.164

Abstract | Full Text

Ammonia-oxidizing archaea have more important role than ammonia-oxidizing bacteria in ammonia oxidation of strongly acidic soils

Li-Mei Zhang, Hang-Wei Hu, Ju-Pei Shen and Ji-Zheng He

ISME J 2012 6: 1032-1045; advance online publication, December 1, 2011; 10.1038/ismej.2011.168

Abstract | Full Text

The Inter-Valley Soil Comparative Survey: the ecology of Dry Valley edaphic microbial communities

Charles K Lee, Béatrice A Barbier, Eric M Bottos, Ian R McDonald and Stephen Craig Cary

ISME J 2012 6: 1046-1057; advance online publication, December 15, 2011; 10.1038/ismej.2011.170

Abstract | Full Text

Contrasting denitrifier communities relate to contrasting N2O emission patterns from acidic peat soils in arctic tundra

Katharina Palmer, Christina Biasi and Marcus A Horn

ISME J 2012 6: 1058-1077; advance online publication, December 1, 2011; 10.1038/ismej.2011.172

Abstract | Full Text

Bacterial community dynamics in the hyporheic zone of an intermittent stream

Catherine M Febria, Paul Beddoes, Roberta R Fulthorpe and D Dudley Williams

ISME J 2012 6: 1078-1088; advance online publication, December 8, 2011; 10.1038/ismej.2011.173

Abstract | Full Text

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