The ISME Journal - Table of Contents alert Volume 10 Issue 3

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TABLE OF CONTENTS Volume 10, Issue 3 (March 2016) In this issue Original Articles Short Communication Also new AOP Sign up for e-alerts Recommend to your library Web feed Subscribe Original Articles Top Experimental insights into the importance of aquatic bacterial community composition to the degradation of dissolved organic matter OPEN Jürg B Logue, Colin A Stedmon, Anne M Kellerman, Nikoline J Nielsen, Anders F Andersson, Hjalmar Laudon, Eva S Lindström and Emma S Kritzberg ISME J 2016 10: 533-545; advance online publication, August 21, 2015; 10.1038/ismej.2015.131 Abstract | Full Text The methylaspartate cycle in haloarchaea and its possible role in carbon metabolism Farshad Borjian, Jing Han, Jing Hou, Hua Xiang and Ivan A Berg ISME J 2016 10: 546-557; advance online publication, August 4, 2015; 10.1038/ismej.2015.132 Abstract | Full Text A natural odor attraction between lactic acid bacteria and the nematode Caenorhabditis elegans Jae Im Choi, Kyoung-hye Yoon, Saraswathi Subbammal Kalichamy, Sung-Sik Yoon and Jin Il Lee ISME J 2016 10: 558-567; advance online publication, August 4, 2015; 10.1038/ismej.2015.134 Abstract | Full Text Marine bacterial community structure resilience to changes in protist predation under phytoplankton bloom conditions Federico Baltar, Joakim Palovaara, Fernando Unrein, Philippe Catala, Karel Horňák, Karel Šimek, Dolors Vaqué, Ramon Massana, Josep M Gasol and Jarone Pinhassi ISME J 2016 10: 568-581; advance online publication, August 11, 2015; 10.1038/ismej.2015.135 Abstract | Full Text Core-satellite populations and seasonality of water meter biofilms in a metropolitan drinking water distribution system Fangqiong Ling, Chiachi Hwang, Mark W LeChevallier, Gary L Andersen and Wen-Tso Liu ISME J 2016 10: 582-595; advance online publication, August 7, 2015; 10.1038/ismej.2015.136 Abstract | Full Text Global diversity and biogeography of deep-sea pelagic prokaryotes Guillem Salazar, Francisco M Cornejo-Castillo, Verónica Benítez-Barrios, Eugenio Fraile-Nuez, X Antón Álvarez-Salgado, Carlos M Duarte, Josep M Gasol and Silvia G Acinas ISME J 2016 10: 596-608; advance online publication, August 7, 2015; 10.1038/ismej.2015.137 Abstract | Full Text Deciphering the bat virome catalog to better understand the ecological diversity of bat viruses and the bat origin of emerging infectious diseases Zhiqiang Wu, Li Yang, Xianwen Ren, Guimei He, Junpeng Zhang, Jian Yang, Zhaohui Qian, Jie Dong, Lilian Sun, Yafang Zhu, Jiang Du, Fan Yang, Shuyi Zhang and Qi Jin ISME J 2016 10: 609-620; advance online publication, August 11, 2015; 10.1038/ismej.2015.138 Abstract | Full Text Modelling extracellular limitations for mediated versus direct interspecies electron transfer Tomas Storck, Bernardino Virdis and Damien J Batstone ISME J 2016 10: 621-631; advance online publication, November 6, 2015; 10.1038/ismej.2015.139 Abstract | Full Text Metabolic footprint of epiphytic bacteria on Arabidopsis thaliana leaves Florian Ryffel, Eric JN Helfrich, Patrick Kiefer, Lindsay Peyriga, Jean-Charles Portais, Jörn Piel and Julia A Vorholt ISME J 2016 10: 632-643; advance online publication, August 25, 2015; 10.1038/ismej.2015.141 Abstract | Full Text The composition of the zebrafish intestinal microbial community varies across development W Zac Stephens, Adam R Burns, Keaton Stagaman, Sandi Wong, John F Rawls, Karen Guillemin and Brendan J M Bohannan ISME J 2016 10: 644-654; advance online publication, September 4, 2015; 10.1038/ismej.2015.140 Abstract | Full Text Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development Adam R Burns, W Zac Stephens, Keaton Stagaman, Sandi Wong, John F Rawls, Karen Guillemin and Brendan JM Bohannan ISME J 2016 10: 655-664; advance online publication, August 21, 2015; 10.1038/ismej.2015.142 Abstract | Full Text Insights in the ecology and evolutionary history of the Miscellaneous Crenarchaeotic Group lineage Mireia Fillol, Jean-Christophe Auguet, Emilio O Casamayor and Carles M Borrego ISME J 2016 10: 665-677; advance online publication, August 18, 2015; 10.1038/ismej.2015.143 Abstract | Full Text Activity and interactions of methane seep microorganisms assessed by parallel transcription and FISH-NanoSIMS analyses OPEN Anne E Dekas, Stephanie A Connon, Grayson L Chadwick, Elizabeth Trembath-Reichert and Victoria J Orphan ISME J 2016 10: 678-692; advance online publication, September 22, 2015; 10.1038/ismej.2015.145 Abstract | Full Text Global distribution and vertical patterns of a prymnesiophyte–cyanobacteria obligate symbiosis Ana M Cabello, Francisco M Cornejo-Castillo, Nicolas Raho, Dolors Blasco, Montserrat Vidal, Stéphane Audic, Colomban de Vargas, Mikel Latasa, Silvia G Acinas and Ramon Massana ISME J 2016 10: 693-706; advance online publication, September 25, 2015; 10.1038/ismej.2015.147 Abstract | Full Text The initial state of the human gut microbiome determines its reshaping by antibiotics OPEN Frédéric Raymond, Amin A Ouameur, Maxime Déraspe, Naeem Iqbal, Hélène Gingras, Bédis Dridi, Philippe Leprohon, Pier-Luc Plante, Richard Giroux, Ève Bérubé, Johanne Frenette, Dominique K Boudreau, Jean-Luc Simard, Isabelle Chabot, Marc-Christian Domingo, Sylvie Trottier, Maurice Boissinot, Ann Huletsky, Paul H Roy, Marc Ouellette, Michel G Bergeron and Jacques Corbeil ISME J 2016 10: 707-720; advance online publication, September 11, 2015; 10.1038/ismej.2015.148 Abstract | Full Text Rapid host switching in generalist Campylobacter strains erodes the signal for tracing human infections OPEN Bethany L Dearlove, Alison J Cody, Ben Pascoe, Guillaume Méric, Daniel J Wilson and Samuel K Sheppard ISME J 2016 10: 721-729; advance online publication, August 25, 2015; 10.1038/ismej.2015.149 Abstract | Full Text A metagenomic window into carbon metabolism at 3 km depth in Precambrian continental crust Cara Magnabosco, Kathleen Ryan, Maggie C Y Lau, Olukayode Kuloyo, Barbara Sherwood Lollar, Thomas L Kieft, Esta van Heerden and Tullis C Onstott ISME J 2016 10: 730-741; advance online publication, September 1, 2015; 10.1038/ismej.2015.150 Abstract | Full Text Lactobacillus rhamnosus GG-supplemented formula expands butyrate-producing bacterial strains in food allergic infants OPEN Roberto Berni Canani, Naseer Sangwan, Andrew T Stefka, Rita Nocerino, Lorella Paparo, Rosita Aitoro, Antonio Calignano, Aly A Khan, Jack A Gilbert and Cathryn R Nagler ISME J 2016 10: 742-750; advance online publication, September 22, 2015; 10.1038/ismej.2015.151 Abstract | Full Text Urban stress is associated with variation in microbial species composition—but not richness—in Manhattan Aspen T Reese, Amy Savage, Elsa Youngsteadt, Krista L McGuire, Adam Koling, Olivia Watkins, Steven D Frank and Robert R Dunn ISME J 2016 10: 751-760; advance online publication, September 22, 2015; 10.1038/ismej.2015.152 Abstract | Full Text Genomic and metagenomic surveys of hydrogenase distribution indicate H2 is a widely utilised energy source for microbial growth and survival Chris Greening, Ambarish Biswas, Carlo R Carere, Colin J Jackson, Matthew C Taylor, Matthew B Stott, Gregory M Cook and Sergio E Morales ISME J 2016 10: 761-777; advance online publication, September 25, 2015; 10.1038/ismej.2015.153 Abstract | Full Text Live to cheat another day: bacterial dormancy facilitates the social exploitation of β-lactamases OPEN Frances Medaney, Tatiana Dimitriu, Richard J Ellis and Ben Raymond ISME J 2016 10: 778-787; advance online publication, October 27, 2015; 10.1038/ismej.2015.154 Abstract | Full Text Short Communication Top Light microenvironment and single-cell gradients of carbon fixation in tissues of symbiont-bearing corals Daniel Wangpraseurt, Mathieu Pernice, Paul Guagliardo, Matt R Kilburn, Peta L Clode, Lubos Polerecky and Michael Kühl ISME J 2016 10: 788-792; advance online publication, August 4, 2015; 10.1038/ismej.2015.133 Abstract | Full Text Advertisement New! 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