The ISME Journal - Table of Contents alert Volume 11 Issue 9

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Advertisement Open for Submissions  A new open access, multi-and interdisciplinary journal dedicated to publishing the finest research on both microbial biofilms and microbiomes, the journal is now open for submissions. Explore the benefits of submitting your next research article. TABLE OF CONTENTS Volume 11, Issue 9 (September 2017) In this issue Perspective Mini-Review Original Articles Short Communication Also new AOP Sign up for e-alerts Recommend to your library Web feed Subscribe Advertisement Celebrating 10 years of The ISME Journal — 2007 to 2017 Thank you to the editors, board members, contributors, reviewers and readers, past and present for their invaluable contributions, and for bringing the journal to this milestone. Watch our anniversary video showing a brief impact overview >>>   Perspective Top Soil aggregates as massively concurrent evolutionary incubators OPEN Matthias C Rillig, Ludo AH Muller and Anika Lehmann ISME J 2017 11: 1943-1948; advance online publication, April 14, 2017; 10.1038/ismej.2017.56 Full Text Mini-Review Top Capturing the genetic makeup of the active microbiome in situ OPEN Esther Singer, Michael Wagner and Tanja Woyke ISME J 2017 11: 1949-1963; advance online publication, June 2, 2017; 10.1038/ismej.2017.59 Abstract | Full Text Original Articles Top Interactions between soil- and dead wood-inhabiting fungal communities during the decay of Norway spruce logs OPEN Raisa Mäkipää, Tiina Rajala, Dmitry Schigel, Katja T Rinne, Taina Pennanen, Nerea Abrego and Otso Ovaskainen ISME J 2017 11: 1964-1974; advance online publication, April 21, 2017; 10.1038/ismej.2017.57 Abstract | Full Text Convergence of gut microbiotas in the adaptive radiations of African cichlid fishes OPEN Laura Baldo, Joan Lluís Pretus, Joan Lluís Riera, Zuzana Musilova, Arnold Roger Bitja Nyom and Walter Salzburger ISME J 2017 11: 1975-1987; advance online publication, May 16, 2017; 10.1038/ismej.2017.62 Abstract | Full Text Comparative transcriptomics analyses reveal the conservation of an ancestral infectious strategy in two bacteriophage genera OPEN Bob G Blasdel, Anne Chevallereau, Marc Monot, Rob Lavigne and Laurent Debarbieux ISME J 2017 11: 1988-1996; advance online publication, May 12, 2017; 10.1038/ismej.2017.63 Abstract | Full Text Fundamental differences in diversity and genomic population structure between Atlantic and Pacific Prochlorococcus Nadav Kashtan, Sara E Roggensack, Jessie W Berta-Thompson, Maor Grinberg, Ramunas Stepanauskas and Sallie W Chisholm ISME J 2017 11: 1997-2011; advance online publication, May 19, 2017; 10.1038/ismej.2017.64 Abstract | Full Text Identifying the core seed bank of a complex boreal bacterial metacommunity Clara Ruiz-González, Juan Pablo Niño-García, Steven W Kembel and Paul A del Giorgio ISME J 2017 11: 2012-2021; advance online publication, June 6, 2017; 10.1038/ismej.2017.67 Abstract | Full Text Autotrophic and heterotrophic acquisition of carbon and nitrogen by a mixotrophic chrysophyte established through stable isotope analysis OPEN Ramon Terrado, Alexis L Pasulka, Alle A-Y Lie, Victoria J Orphan, Karla B Heidelberg and David A Caron ISME J 2017 11: 2022-2034; advance online publication, May 19, 2017; 10.1038/ismej.2017.68 Abstract | Full Text Diabetes-associated microbiota in fa/fa rats is modified by Roux-en-Y gastric bypass OPEN Tulika Arora, Florian Seyfried, Neil G Docherty, Valentina Tremaroli, Carel W le Roux, Rosie Perkins and Fredrik Bäckhed ISME J 2017 11: 2035-2046; advance online publication, May 19, 2017; 10.1038/ismej.2017.70 Abstract | Full Text Distinctive microbiomes and metabolites linked with weight loss after gastric bypass, but not gastric banding Zehra Esra Ilhan, John K DiBaise, Nancy G Isern, David W Hoyt, Andrew K Marcus, Dae-Wook Kang, Michael D Crowell, Bruce E Rittmann and Rosa Krajmalnik-Brown ISME J 2017 11: 2047-2058; advance online publication, May 26, 2017; 10.1038/ismej.2017.71 Abstract | Full Text Genomics and metagenomics of trimethylamine-utilizing Archaea in the human gut microbiome Guillaume Borrel, Angela McCann, Jennifer Deane, Marta C Neto, Denise B Lynch, Jean- François Brugère and Paul W O'Toole ISME J 2017 11: 2059-2074; advance online publication, June 6, 2017; 10.1038/ismej.2017.72 Abstract | Full Text A tale of two risks: smoking, diabetes and the subgingival microbiome OPEN Sukirth M Ganesan, Vinayak Joshi, Megan Fellows, Shareef M Dabdoub, Haikady N Nagaraja, Benjamin O'Donnell, Neeta Rohit Deshpande and Purnima S Kumar ISME J 2017 11: 2075-2089; advance online publication, May 23, 2017; 10.1038/ismej.2017.73 Abstract | Full Text Epibionts dominate metabolic functional potential of Trichodesmium colonies from the oligotrophic ocean OPEN Kyle R Frischkorn, Mónica Rouco, Benjamin A S Van Mooy and Sonya T Dyhrman ISME J 2017 11: 2090-2101; advance online publication, May 23, 2017; 10.1038/ismej.2017.74 Abstract | Full Text Alpine soil carbon is vulnerable to rapid microbial decomposition under climate cooling Linwei Wu, Yunfeng Yang, Shiping Wang, Haowei Yue, Qiaoyan Lin, Yigang Hu, Zhili He, Joy D Van Nostrand, Lauren Hale, Xiangzhen Li, Jack A Gilbert and Jizhong Zhou ISME J 2017 11: 2102-2111; advance online publication, May 23, 2017; 10.1038/ismej.2017.75 Abstract | Full Text Successive range expansion promotes diversity and accelerates evolution in spatially structured microbial populations Felix Goldschmidt, Roland R Regoes and David R Johnson ISME J 2017 11: 2112-2123; advance online publication, May 23, 2017; 10.1038/ismej.2017.76 Abstract | Full Text Crenothrix are major methane consumers in stratified lakes OPEN Kirsten Oswald, Jon S Graf, Sten Littmann, Daniela Tienken, Andreas Brand, Bernhard Wehrli, Mads Albertsen, Holger Daims, Michael Wagner, Marcel MM Kuypers, Carsten J Schubert and Jana Milucka ISME J 2017 11: 2124-2140; advance online publication, June 6, 2017; 10.1038/ismej.2017.77 Abstract | Full Text Succession in the petroleum reservoir microbiome through an oil field production lifecycle OPEN Adrien Vigneron, Eric B Alsop, Bartholomeus P Lomans, Nikos C Kyrpides, Ian M Head and Nicolas Tsesmetzis ISME J 2017 11: 2141-2154; advance online publication, May 19, 2017; 10.1038/ismej.2017.78 Abstract | Full Text Short Communication Top In situ light responses of the proteorhodopsin-bearing Antarctic sea-ice bacterium, Psychroflexus torques David J Burr, Andrew Martin, Elizabeth W Maas and Ken G Ryan ISME J 2017 11: 2155-2158; advance online publication, May 19, 2017; 10.1038/ismej.2017.65 Abstract | Full Text Natureevents is a fully searchable, multi-disciplinary database designed to maximise exposure for events organisers. The contents of the Natureevents Directory are now live. The digital version is available here. Find the latest scientific conferences, courses, meetings and symposia on natureevents.com. For event advertising opportunities across the Nature Publishing Group portfolio please contact natureevents@nature.com More Nature Events Please note that you need to be a subscriber or site-licence holder to enjoy full-text access to The ISME Journal. In order to do so, please purchase a subscription. You have been sent this Table of Contents Alert because you have opted in to receive it. You can change or discontinue your e-mail alerts at any time, by modifying your preferences on your nature.com account at: www.nature.com/nams/svc/myaccount (You will need to log in to be recognised as a nature.com registrant). For further technical assistance, please contact our registration department. For print subscription enquiries, please contact our subscription department. 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