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The ISME Journal - Table of Contents alert Volume 11 Issue 6

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Volume 11, Issue 6 (June 2017)

In this issue
Original Articles
Short Communications

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Original Articles


Chance and necessity in the genome evolution of endosymbiotic bacteria of insects OPEN

Beatriz Sabater-Muñoz, Christina Toft, David Alvarez-Ponce and Mario A Fares

ISME J 2017 11: 1291-1304; advance online publication, March 21, 2017; 10.1038/ismej.2017.18

Abstract | Full Text

Chemical microenvironments and single-cell carbon and nitrogen uptake in field-collected colonies of Trichodesmium under different pCO2 OPEN

Meri J Eichner, Isabell Klawonn, Samuel T Wilson, Sten Littmann, Martin J Whitehouse, Matthew J Church, Marcel MM Kuypers, David M Karl and Helle Ploug

ISME J 2017 11: 1305-1317; advance online publication, April 11, 2017; 10.1038/ismej.2017.15

Abstract | Full Text

Impact of water heater temperature setting and water use frequency on the building plumbing microbiome OPEN

Pan Ji, William J Rhoads, Marc A Edwards and Amy Pruden

ISME J 2017 11: 1318-1330; advance online publication, March 10, 2017; 10.1038/ismej.2017.14

Abstract | Full Text

Biogeography and diversity of Collodaria (Radiolaria) in the global ocean

Tristan Biard, Estelle Bigeard, Stéphane Audic, Julie Poulain, Andres Gutierrez-Rodriguez, Stéphane Pesant, Lars Stemmann and Fabrice Not

ISME J 2017 11: 1331-1344; advance online publication, March 24, 2017; 10.1038/ismej.2017.12

Abstract | Full Text

Habitat-specific patterns and drivers of bacterial β-diversity in China’s drylands

Xiao-Bo Wang, Xiao-Tao Lü, Jing Yao, Zheng-Wen Wang, Ye Deng, Wei-Xin Cheng, Ji-Zhong Zhou and Xing-Guo Han

ISME J 2017 11: 1345-1358; advance online publication, March 10, 2017; 10.1038/ismej.2017.11

Abstract | Full Text

Mixed transmission modes and dynamic genome evolution in an obligate animal–bacterial symbiosis

Shelbi L Russell, Russell B Corbett-Detig and Colleen M Cavanaugh

ISME J 2017 11: 1359-1371; advance online publication, February 24, 2017; 10.1038/ismej.2017.10

Abstract | Full Text

Seasonal patterns in Arctic prasinophytes and inferred ecology of Bathycoccus unveiled in an Arctic winter metagenome

Nathalie Joli, Adam Monier, Ramiro Logares and Connie Lovejoy

ISME J 2017 11: 1372-1385; advance online publication, March 7, 2017; 10.1038/ismej.2017.7

Abstract | Full Text

Origin and fate of methane in the Eastern Tropical North Pacific oxygen minimum zone OPEN

Panagiota-Myrsini Chronopoulou, Felicity Shelley, William J Pritchard, Susanna T Maanoja and Mark Trimmer

ISME J 2017 11: 1386-1399; advance online publication, February 28, 2017; 10.1038/ismej.2017.6

Abstract | Full Text

Linking the community structure of arbuscular mycorrhizal fungi and plants: a story of interdependence?

Sebastian Horn, Stefan Hempel, Erik Verbruggen, Matthias C Rillig and Tancredi Caruso

ISME J 2017 11: 1400-1411; advance online publication, February 28, 2017; 10.1038/ismej.2017.5

Abstract | Full Text

Annual community patterns are driven by seasonal switching between closely related marine bacteria

Christopher S Ward, Cheuk-Man Yung, Katherine M Davis, Sara K Blinebry, Tiffany C Williams, Zackary I Johnson and Dana E Hunt

ISME J 2017 11: 1412-1422; advance online publication, February 24, 2017; 10.1038/ismej.2017.4

Abstract | Full Text

Soil microorganisms can overcome respiration inhibition by coupling intra- and extracellular metabolism: 13C metabolic tracing reveals the mechanisms

Ezekiel K Bore, Carolin Apostel, Sara Halicki, Yakov Kuzyakov and Michaela A Dippold

ISME J 2017 11: 1423-1433; advance online publication, February 3, 2017; 10.1038/ismej.2017.3

Abstract | Full Text

Underlying mechanisms for syntrophic metabolism of essential enzyme cofactors in microbial communities

Margaret F Romine, Dmitry A Rodionov, Yukari Maezato, Andrei L Osterman and William C Nelson

ISME J 2017 11: 1434-1446; advance online publication, February 10, 2017; 10.1038/ismej.2017.2

Abstract | Full Text

Divergent extremes but convergent recovery of bacterial and archaeal soil communities to an ongoing subterranean coal mine fire OPEN

Sang-Hoon Lee, Jackson W Sorensen, Keara L Grady, Tammy C Tobin and Ashley Shade

ISME J 2017 11: 1447-1459; advance online publication, March 10, 2017; 10.1038/ismej.2017.1

Abstract | Full Text

Bacterial community segmentation facilitates the prediction of ecosystem function along the coast of the western Antarctic Peninsula

Jeff S Bowman, Linda A Amaral-Zettler, Jeremy J Rich, Catherine M Luria and Hugh W Ducklow

ISME J 2017 11: 1460-1471; advance online publication, January 20, 2017; 10.1038/ismej.2016.204

Abstract | Full Text

The fitness costs and trade-off shapes associated with the exclusion of nine antibiotics by OmpF porin channels

Katherine Phan and Thomas Ferenci

ISME J 2017 11: 1472-1482; advance online publication, January 10, 2017; 10.1038/ismej.2016.202

Abstract | Full Text

Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats OPEN

Meinhard Simon, Carmen Scheuner, Jan P Meier-Kolthoff, Thorsten Brinkhoff, Irene Wagner-Döbler, Marcus Ulbrich, Hans-Peter Klenk, Dietmar Schomburg, Jörn Petersen and Markus Göker

ISME J 2017 11: 1483-1499; advance online publication, January 20, 2017; 10.1038/ismej.2016.198

Abstract | Full Text

Short Communications


Host specificity of Symbiodinium variants revealed by an ITS2 metahaplotype approach

Edward G Smith, Remi N Ketchum and John A Burt

ISME J 2017 11: 1500-1503; advance online publication, February 17, 2017; 10.1038/ismej.2016.206

Abstract | Full Text

Membrane vesicle-mediated bacterial communication OPEN

Masanori Toyofuku, Kana Morinaga, Yohei Hashimoto, Jenny Uhl, Hiroko Shimamura, Hideki Inaba, Philippe Schmitt-Kopplin, Leo Eberl and Nobuhiko Nomura

ISME J 2017 11: 1504-1509; advance online publication, March 10, 2017; 10.1038/ismej.2017.13

Abstract | Full Text



Divergent functional isoforms drive niche specialisation for nutrient acquisition and use in rumen microbiome OPEN

Francesco Rubino, Ciara Carberry, Sinéad M Waters, David Kenny, Matthew S McCabe and Christopher J Creevey

ISME J 2017 11: 1510; 10.1038/ismej.2017.34

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