Tuesday, May 9, 2017

Nature Biotechnology Contents: Volume 35 pp 389 - 484

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TABLE OF CONTENTS

May 2017 Volume 35, Issue 5

Editorial
News
Bioentrepreneur
Opinion and Comment
Features
News and Views
Research
Careers and Recruitment

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Editorial

Top

CRISPR catch-up   p389
doi:10.1038/nbt.3885
The hegemony of the CRISPR system as a gene-editing therapy is not as assured as its use as a tool in basic research.

News

Top

First eczema biologic debuts but price could restrict use   pp391 - 392
Elie Dolgin
doi:10.1038/nbt0517-391

Genentech's Ocrevus heralds new chapter in MS treatment   pp393 - 394
Cormac Sheridan
doi:10.1038/nbt0517-393

Astex shapes CDK4/6 inhibitor for approval   pp395 - 396
Mark Peplow
doi:10.1038/nbt0517-395

UC granted CRISPR patents in Europe, appeals in US   p396
doi:10.1038/nbt0517-396

Digital farming attracts cash to agtech startups   pp397 - 398
Emily Waltz
doi:10.1038/nbt0517-397

FDA approves PARP inhibitor for ovarian cancer   p398
doi:10.1038/nbt0517-398

Genomics pioneer gets its first drug   p399
Mark Ratner
doi:10.1038/nbt0517-399

Data Page

Drug pipeline: 1Q17   p400
Laura DeFrancesco
doi:10.1038/nbt.3874

News Feature

Living in a microbial world   pp401 - 403
Charles Schmidt
doi:10.1038/nbt.3868
Our personal ecosystem of microbes is shed on everything we touch and everyplace we go. Charles Schmidt reports on efforts to harness this information to improve human health and activity.


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Bioentrepreneur

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Data Page

Academic partnerships 2016   pp404 - 405
Brady Huggett
doi:10.1038/nbt.3861

Podcast

First Rounders: Rachel Haurwitz   p405
doi:10.1038/nbt.3861

Opinion and Comment

Top
Correspondence

Discovering and linking public omics data sets using the Omics Discovery Index   pp406 - 409
Yasset Perez-Riverol, Mingze Bai, Felipe da Veiga Leprevost, Silvano Squizzato, Young Mi Park et al.
doi:10.1038/nbt.3790

Firmiana: towards a one-stop proteomic cloud platform for data processing and analysis   pp409 - 412
Jinwen Feng, Chen Ding, Naiqi Qiu, Xiaotian Ni, Dongdong Zhan et al.
doi:10.1038/nbt.3825

Features

Top

Biotech's wellspring—a survey of the health of the private sector in 2016   pp413 - 420
Stacy Lawrence
doi:10.1038/nbt.3867
Investment is skewing early as venture capitalists grapple with a volatile political environment, a hot stock market and a flagging IPO outlook.

Patents

Who reads patents?   pp421 - 424
Lisa Larrimore Ouellette
doi:10.1038/nbt.3864
Biotechnology and chemistry researchers look to the patent literature as a source of technical information more than researchers in other fields, and few researchers are deterred from reading patents by concerns about enhanced legal liability.

Recent patents in plant organogenesis   p425
doi:10.1038/nbt.3883


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News and Views

Top

Reprogramming the diseased brain   pp426 - 428
Stephen B Dunnett and Anne E Rosser
doi:10.1038/nbt.3869
Direct conversion of astrocytes to dopamine neurons in vivo offers fresh optimism for the development of improved Parkinson's disease therapies.

See also: Research by Rivetti di Val Cervo et al.

Base editing on the rise   pp428 - 429
Andrew May
doi:10.1038/nbt.3871
Research on base editing leads to new enzymes, genome-wide specificity measurements, and edited plants and animals.

See also: Research by Kim et al. | Research by Zong et al. | Research by Shimatani et al. | Research by Kim et al.

Research Highlights   p429
doi:10.1038/nbt.3872

Genome organization by the slice   p430
Markus Elsner
doi:10.1038/nbt.3866

Biotechnology
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Research

Top
Brief Communications

Efficient genome editing in the mouse brain by local delivery of engineered Cas9 ribonucleoprotein complexes   pp431 - 434
Brett T Staahl, Madhurima Benekareddy, Claire Coulon-Bainier, Ashwin A Banfal, Stephen N Floor et al.
doi:10.1038/nbt.3806
Gene editing in the mouse brain is achieved by injection of Cas9 ribonucleoprotein complexes.

Highly efficient RNA-guided base editing in mouse embryos   pp435 - 437
Kyoungmi Kim, Seuk-Min Ryu, Sang-Tae Kim, Gayoung Baek, Daesik Kim et al.
doi:10.1038/nbt.3816
Mice with targeted point mutations are generated efficiently using Cas9-cytidine deaminase fusions.

See also: News and Views by May

Precise base editing in rice, wheat and maize with a Cas9- cytidine deaminase fusion   pp438 - 440
Yuan Zong, Yanpeng Wang, Chao Li, Rui Zhang, Kunling Chen et al.
doi:10.1038/nbt.3811
Single DNA base pairs are edited in wheat, rice and maize using a Cas9 nickase fusion protein.

See also: News and Views by May

Targeted base editing in rice and tomato using a CRISPR-Cas9 cytidine deaminase fusion   pp441 - 443
Zenpei Shimatani, Sachiko Kashojiya, Mariko Takayama, Rie Terada, Takayuki Arazoe et al.
doi:10.1038/nbt.3833
Targeted editing of single base pairs is achieved in monocot rice and dicot tomato using Target-AID (Cas9 activation-induced cytidine deaminase fusion).

See also: News and Views by May

Articles

Induction of functional dopamine neurons from human astrocytes in vitro and mouse astrocytes in a Parkinson's disease model   pp444 - 452
Pia Rivetti di Val Cervo, Roman A Romanov, Giada Spigolon, Debora Masini, Elisa Martin-Montanez et al.
doi:10.1038/nbt.3835
In vivo reprogramming of astrocytes to dopamine neurons improves motor behavior in a mouse model of Parkinson's disease.

See also: News and Views by Dunnett & Rosser

Large-scale design of robust genetic circuits with multiple inputs and outputs for mammalian cells   pp453 - 462
Benjamin H Weinberg, N T Hang Pham, Leidy D Caraballo, Thomas Lozanoski, Adrien Engel et al.
doi:10.1038/nbt.3805
Genetic circuits that are reliable, robust, and scalable are built without the need for optimization using a recombinase-based system.

Synergistic drug combinations for cancer identified in a CRISPR screen for pairwise genetic interactions   pp463 - 474
Kyuho Han, Edwin E Jeng, Gaelen T Hess, David W Morgens, Amy Li et al.
doi:10.1038/nbt.3834
An improved strategy for large-scale combinatorial CRISPR screening enables the identification of synergistic drug targets for cancer.

Letter

Genome-wide target specificities of CRISPR RNA-guided programmable deaminases   pp475 - 480
Daesik Kim, Kayeong Lim, Sang-Tae Kim, Sun-heui Yoon, Kyoungmi Kim et al.
doi:10.1038/nbt.3852
Base editors composed of Cas9 fused to a deaminase show high specificity in genome-wide analyses.

See also: News and Views by May

Addendum

Addendum: Editorial Expression of Concern: DNA-guided genome editing using the Natronobacterium gregoryi Argonaute   p481
Feng Gao, Xiao Z Shen, Feng Jiang, Yongqiang Wu and Chunyu Han
doi:10.1038/nbt0517-481a

Errata

Erratum: Drugging the gut microbiome   p481
Ken Garber
doi:10.1038/nbt0517-481b

Erratum: An optical probe of synaptic plasticity   p481
Tal Laviv and Ryohei Yasuda
doi:10.1038/nbt0517-481c

Corrigenda

Corrigendum: Response to [ldquo]Railroading at the FDA[rdquo]   p481
Francesco Muntoni, Sue Fletcher and Steve Wilton
doi:10.1038/nbt0517-481d

Corrigendum: A FRET sensor enables quantitative measurements of membrane charges in live cells   p481
Yuanqing Ma, Yui Yamamoto, Philip R Nicovich, Jesse Goyette, Jeremie Rossy et al.
doi:10.1038/nbt0517-481e

Careers and Recruitment

Top

First-quarter biotech job picture   p482
Michael Francisco
doi:10.1038/nbt.3875

People

People   p484
doi:10.1038/nbt.3881

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