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The ISME Journal - Table of Contents alert Volume 10 Issue 4

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The ISME Journal

TABLE OF CONTENTS

Volume 10, Issue 4 (April 2016)

In this issue
Commentary
Original Articles
Short Communications

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Commentary

Top

On the concept of a psychrophile

Ricardo Cavicchioli

ISME J 2016 10: 793-795; advance online publication, September 15, 2015; 10.1038/ismej.2015.160

Full Text

Original Articles

Top

Activity and community structures of sulfate-reducing microorganisms in polar, temperate and tropical marine sediments

Alberto Robador, Albert L Müller, Joanna E Sawicka, David Berry, Casey R J Hubert, Alexander Loy, Bo Barker Jørgensen and Volker Brüchert

ISME J 2016 10: 796-809; advance online publication, September 11, 2015; 10.1038/ismej.2015.157

Abstract | Full Text

Metatranscriptomic insights on gene expression and regulatory controls in Candidatus Accumulibacter phosphatis OPEN

Ben O Oyserman, Daniel R Noguera, Tijana Glavina del Rio, Susannah G Tringe and Katherine D McMahon

ISME J 2016 10: 810-822; advance online publication, November 10, 2015; 10.1038/ismej.2015.155

Abstract | Full Text

Growth rates and rRNA content of four marine bacteria in pure cultures and in the Delaware estuary

Thomas S Lankiewicz, Matthew T Cottrell and David L Kirchman

ISME J 2016 10: 823-832; advance online publication, September 22, 2015; 10.1038/ismej.2015.156

Abstract | Full Text

Refining the phylum Chlorobi by resolving the phylogeny and metabolic potential of the representative of a deeply branching, uncultivated lineage

Jennifer Hiras, Yu-Wei Wu, Stephanie A Eichorst, Blake A Simmons and Steven W Singer

ISME J 2016 10: 833-845; advance online publication, September 1, 2015; 10.1038/ismej.2015.158

Abstract | Full Text

Interspecific diversity reduces and functionally substitutes for intraspecific variation in biofilm communities

Kai Wei Kelvin Lee, Joey Kuok Hoong Yam, Manisha Mukherjee, Saravanan Periasamy, Peter D Steinberg, Staffan Kjelleberg and Scott A Rice

ISME J 2016 10: 846-857; advance online publication, September 25, 2015; 10.1038/ismej.2015.159

Abstract | Full Text

Metagenomic reconstructions of bacterial CRISPR loci constrain population histories

Christine L Sun, Brian C Thomas, Rodolphe Barrangou and Jillian F Banfield

ISME J 2016 10: 858-870; advance online publication, September 22, 2015; 10.1038/ismej.2015.162

Abstract | Full Text

Non-pathogenic Rhizobium radiobacter F4 deploys plant beneficial activity independent of its host Piriformospora indica

Stefanie P Glaeser, Jafargholi Imani, Ibrahim Alabid, Huijuan Guo, Neelendra Kumar, Peter Kämpfer, Martin Hardt, Jochen Blom, Alexander Goesmann, Michael Rothballer, Anton Hartmann and Karl-Heinz Kogel

ISME J 2016 10: 871-884; advance online publication, October 23, 2015; 10.1038/ismej.2015.163

Abstract | Full Text

Stochastic distribution of small soil eukaryotes resulting from high dispersal and drift in a local environment

Mohammad Bahram, Petr Kohout, Sten Anslan, Helery Harend, Kessy Abarenkov and Leho Tedersoo

ISME J 2016 10: 885-896; advance online publication, September 22, 2015; 10.1038/ismej.2015.164

Abstract | Full Text

An intracellular replication niche for Vibrio cholerae in the amoeba Acanthamoeba castellanii OPEN

Charles Van der Henst, Tiziana Scrignari, Catherine Maclachlan and Melanie Blokesch

ISME J 2016 10: 897-910; advance online publication, September 22, 2015; 10.1038/ismej.2015.165

Abstract | Full Text

Food availability affects the strength of mutualistic host–microbiota interactions in Daphnia magna

Martijn Callens, Emilie Macke, Koenraad Muylaert, Peter Bossier, Bart Lievens, Michael Waud and Ellen Decaestecker

ISME J 2016 10: 911-920; advance online publication, September 25, 2015; 10.1038/ismej.2015.166

Abstract | Full Text

Structure and function of natural sulphide-oxidizing microbial mats under dynamic input of light and chemical energy

Judith M Klatt, Steffi Meyer, Stefan Häusler, Jennifer L Macalady, Dirk de Beer and Lubos Polerecky

ISME J 2016 10: 921-933; advance online publication, September 25, 2015; 10.1038/ismej.2015.167

Abstract | Full Text

Inhibitory bacteria reduce fungi on early life stages of endangered Colorado boreal toads (Anaxyrus boreas)

Jordan G Kueneman, Douglas C Woodhams, Will Van Treuren, Holly M Archer, Rob Knight and Valerie J McKenzie

ISME J 2016 10: 934-944; advance online publication, November 13, 2015; 10.1038/ismej.2015.168

Abstract | Full Text

Large variability of bathypelagic microbial eukaryotic communities across the world’s oceans

Massimo C Pernice, Caterina R Giner, Ramiro Logares, Júlia Perera-Bel, Silvia G Acinas, Carlos M Duarte, Josep M Gasol and Ramon Massana

ISME J 2016 10: 945-958; advance online publication, October 9, 2015; 10.1038/ismej.2015.170

Abstract | Full Text

Predicting microbial traits with phylogenies

Marta Goberna and Miguel Verdú

ISME J 2016 10: 959-967; advance online publication, September 15, 2015; 10.1038/ismej.2015.171

Abstract | Full Text

Lipid remodelling is a widespread strategy in marine heterotrophic bacteria upon phosphorus deficiency OPEN

Marta Sebastián, Alastair F Smith, José M González, Helen F Fredricks, Benjamin Van Mooy, Michal KoblíΕΎek, Joost Brandsma, Grielof Koster, Mireia Mestre, Behzad Mostajir, Paraskevi Pitta, Anthony D Postle, Pablo Sánchez, Josep M Gasol, David J Scanlan and Yin Chen

ISME J 2016 10: 968-978; advance online publication, November 13, 2015; 10.1038/ismej.2015.172

Abstract | Full Text

Bacterial diversity and community composition from seasurface to subseafloor OPEN

Emily A Walsh, John B Kirkpatrick, Scott D Rutherford, David C Smith, Mitchell Sogin and Steven D'Hondt

ISME J 2016 10: 979-989; advance online publication, October 2, 2015; 10.1038/ismej.2015.175

Abstract | Full Text

Heterogeneous composition of key metabolic gene clusters in a vent mussel symbiont population OPEN

Tetsuro Ikuta, Yoshihiro Takaki, Yukiko Nagai, Shigeru Shimamura, Miwako Tsuda, Shinsuke Kawagucci, Yui Aoki, Koji Inoue, Morimi Teruya, Kazuhito Satou, Kuniko Teruya, Makiko Shimoji, Hinako Tamotsu, Takashi Hirano, Tadashi Maruyama and Takao Yoshida

ISME J 2016 10: 990-1001; advance online publication, September 29, 2015; 10.1038/ismej.2015.176

Abstract | Full Text

Discordant temporal development of bacterial phyla and the emergence of core in the fecal microbiota of young children

Jing Cheng, Tamar Ringel-Kulka, Ineke Heikamp-de Jong, Yehuda Ringel, Ian Carroll, Willem M de Vos, Jarkko Salojärvi and Reetta Satokari

ISME J 2016 10: 1002-1014; advance online publication, October 2, 2015; 10.1038/ismej.2015.177

Abstract | Full Text

Short Communications

Top

Metatranscriptomic insights into polyphosphate metabolism in marine sediments

Daniel S Jones, Beverly E Flood and Jake V Bailey

ISME J 2016 10: 1015-1019; advance online publication, September 18, 2015; 10.1038/ismej.2015.169

Abstract | Full Text

16Stimator: statistical estimation of ribosomal gene copy numbers from draft genome assemblies

Matthew Perisin, Madlen Vetter, Jack A Gilbert and Joy Bergelson

ISME J 2016 10: 1020-1024; advance online publication, September 11, 2015; 10.1038/ismej.2015.161

Abstract | Full Text

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