Tuesday, June 9, 2015

Nature Biotechnology Contents: Volume 33 pp 567 - 670

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TABLE OF CONTENTS

June 2015 Volume 33, Issue 6

Editorial
News
Bioentrepreneur
Opinion and Comment
Features
News and Views
Computational Biology
Research
Careers and Recruitment

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Editorial

Top

The coming era of human phenotyping   p567
doi:10.1038/nbt.3266
The Apple ResearchKit, the latest effort to bring deep phenotyping to the masses, heralds the arrival of large-scale human population research.

News

Top

First oncolytic virus edges towards approval in surprise vote   pp569 - 570
Cormac Sheridan
doi:10.1038/nbt0615-569

CAR-T field booms as next-generation platforms attract big players   pp571 - 572
Chris Morrison
doi:10.1038/nbt0615-571

Biogen's anti-LINGO promises nerve repair   p573
doi:10.1038/nbt0615-573b

Takeda moves into stem cells   p573
doi:10.1038/nbt0615-573c

Heart failure gene therapy disappoints but experts keep the faith   pp573 - 574
Mark Ratner
doi:10.1038/nbt0615-573a

Industry chases pan-genotypic and shorter HCV treatments   pp575 - 576
Anna Azvolinsky
doi:10.1038/nbt0615-575

Cold Spring Harbor in translation   p576
doi:10.1038/nbt0615-576

Alnylam's RNAi therapy targets amyloid disease   p577
Ken Garber
doi:10.1038/nbt0615-577a

Backlog cripples China's drug regulator   p577
doi:10.1038/nbt0615-577b

Brazil approves transgenic eucalyptus   p577
doi:10.1038/nbt0615-577c

EC approves long overdue GM plants   p578
doi:10.1038/nbt0615-578b

Medtronic deal flurry raises artificial pancreas prospects   pp578 - 579
Emily Waltz
doi:10.1038/nbt0615-578a

Around the world in a month   p579
doi:10.1038/nbt0615-579

Data Page

Drug pipeline: 1Q15   p580
Laura DeFrancesco
doi:10.1038/nbt.3261

Bioentrepreneur

Top
Building a business

Bridging tech and biotech   pp581 - 583
Pieter van Rooyen
doi:10.1038/nbt.3260

Podcast

First Rounders Podcast: Colin Goddard   p583
doi:10.1038/nbt.3255

Opinion and Comment

Top
Correspondence

In vivo genome editing using nuclease-encoding mRNA corrects SP-B deficiency   pp584 - 586
Azita J Mahiny, Alexander Dewerth, Lauren E Mays, Mohammed Alkhaled, Benedikt Mothes et al.
doi:10.1038/nbt.3241

Cardiac regeneration validated   p587
Konstantinos Malliaras and Eduardo Marban
doi:10.1038/nbt.3254

Response to Cardiac regeneration validated   p587
Anna V Naumova, Michel Modo, Anna Moore, Joseph A Frank and Charles E Murry
doi:10.1038/nbt.3257

Biological products and GAIN Act eligibility   pp588 - 589
Samareh Azeredo da Silveira
doi:10.1038/nbt.3253

Accelerating innovation in rapid diagnostics and targeted antibacterials   pp589 - 590
Thomas J Hwang, John H Powers, Daniel Carpenter and Aaron S Kesselheim
doi:10.1038/nbt.3251

The ethics of publishing human germline research   pp590 - 592
Arun Sharma and Christopher Thomas Scott
doi:10.1038/nbt.3252

Commentary

Alexander Rich 1924-2015   pp593 - 598
Shuguang Zhang and Burghardt Wittig
doi:10.1038/nbt.3262
One of molecular biology's intellectual leaders, Alex Rich made fundamental discoveries concerning nucleic acids and ribosomes, which served not only as a foundation for modern biology but also spurred the field of biotechnology.

Features

Top
Patents

Access to new technologies in multipatented vaccines: challenges for Brazil   pp599 - 603
Cristina Possas, Adelaide Maria de Souza Antunes, Flavia Maria Lins Mendes, Suzanne de Oliveira Rodrigues Schumacher, Reinaldo Menezes Martins et al.
doi:10.1038/nbt.3244
Partnerships, technology transfer and targeted policies are needed to accelerate Brazil's participation in global vaccine research and development.

Recent patent applications in regenerative medicine   p604
doi:10.1038/nbt.3264

News and Views

Top

Beyond the reference genome   pp605 - 606
Carlos D Bustamante and Morten Rasmussen
doi:10.1038/nbt.3249
Both strands of a diploid genome can now be efficiently sequenced de novo, unlocking the diversity of the human gene pool.

See also: Research by Cao et al.

Epigenome editing made easy   pp606 - 607
Gabriel E Zentner and Steven Henikoff
doi:10.1038/nbt.3248
Fusions of Cas9 to histone-modifying enzymes enable functional interrogation of the epigenome.

The heritable immune system   pp608 - 609
Judy Cho
doi:10.1038/nbt.3256
Big data sets are galvanizing our ability to decipher the heritability of immune responses.

Research Highlights   p609
doi:10.1038/nbt.3250

Biotechnology
JOBS of the week
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Chair of the McGill University Department of Biochemistry
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3 Positions in Bioinformatics
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Computational Biology

Top
Analysis

COMPASS identifies T-cell subsets correlated with clinical outcomes   pp610 - 616
Lin Lin, Greg Finak, Kevin Ushey, Chetan Seshadri, Thomas R Hawn et al.
doi:10.1038/nbt.3187
Computational analysis of antigen-specific T cell subsets highlights individual-level variation in immune response quality.

Research

Top
Articles

De novo assembly of a haplotype-resolved human genome   pp617 - 622
Hongzhi Cao, Honglong Wu, Ruibang Luo, Shujia Huang, Yuhui Sun et al.
doi:10.1038/nbt.3200
A human genome resolved at the haplotype level without a reference genome reveals previously undetected sequences.

See also: News and Views by Bustamante & Rasmussen

Assembling large genomes with single-molecule sequencing and locality-sensitive hashing   pp623 - 630
Konstantin Berlin, Sergey Koren, Chen-Shan Chin, James P Drake, Jane M Landolin et al.
doi:10.1038/nbt.3238
An assembly algorithm that overlaps noisy long reads enables accurate and fast assembly of large genomes from single-molecule real-time sequences.

Multiplexed tracking of combinatorial genomic mutations in engineered cell populations   pp631 - 637
Ramsey I Zeitoun, Andrew D Garst, George D Degen, Gur Pines, Thomas J Mansell et al.
doi:10.1038/nbt.3177
An approach called TRACE enables mapping of millions of mutations in engineered cell populations.

Generation of articular chondrocytes from human pluripotent stem cells   pp638 - 645
April M Craft, Jason S Rockel, Yulia Nartiss, Rita A Kandel, Benjamin A Alman et al.
doi:10.10.38/nbt.3210
Articular cartilage cells, which maintain synovial joints, are generated in culture from human pluripotent stem cells.

Functional analysis of a chromosomal deletion associated with myelodysplastic syndromes using isogenic human induced pluripotent stem cells   pp646 - 655
Andriana G Kotini, Chan-Jung Chang, Ibrahim Boussaad, Jeffrey J Delrow, Emily K Dolezal et al.
doi:10.1038/nbt.3178
Cellular reprogramming is used to pinpoint the genetic abnormalities in a blood cancer caused by a large chromosomal deletion.

Letters

Comprehensive models of human primary and metastatic colorectal tumors in immunodeficient and immunocompetent mice by chemokine targeting   pp656 - 660
Huanhuan Joyce Chen, Jian Sun, Zhiliang Huang, Harry Hou Jr, Myra Arcilla et al.
doi:10.1038/nbt.3239
New xenograft models of colorectal cancer exhibit metastasis to the liver, use immunocompetent mice and show improved resistance to chemotherapy.

Discovery of cancer drug targets by CRISPR-Cas9 screening of protein domains   pp661 - 667
Junwei Shi, Eric Wang, Joseph P Milazzo, Zihua Wang, Justin B Kinney et al.
doi:10.1038/nbt.3235
Cancer drug targets are identified by CRISPR-based screens that knock out functional protein domains.

Careers and Recruitment

Top

Career coaching for scientists   pp668 - 669
Joanne Kamens
doi:10.1038/nbt.3259
Looking to make an investment in your future? There are many experienced coaches willing to help.

People

People   p670
doi:10.1038/nbt.3265

Top
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