Friday, November 7, 2014

Nature Biotechnology Contents: Volume 32 pp 1067 - 1168

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Nature Biotechnology

TABLE OF CONTENTS

November 2014 Volume 32, Issue 11

Editorial
News
Correction
Bioentrepreneur
Opinion and Comment
Features
News and Views
Computational Biology
Research
Careers and Recruitment

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RNA Sequencing Quality Control (SEQC)

Articles from Nature Biotechnology, Nature Communications and Scientific Data presents results from The RNA Sequencing Quality Control (SEQC) project. This is the second phase of a collaboration between government, academic and industry researchers as part of the MicroArray Quality Control (MAQC) consortium.

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Editorial

Top

Outpaced by an outbreak   p1067
doi:10.1038/nbt.3074
The international community's woeful response to the West African Ebola epidemic has been compounded by the lack of vaccines and therapies on the ground. That is why US government cutbacks to biodefense funding should be reevaluated and five-year funding tranches restored.

News

Top

Landmark approvals in idiopathic pulmonary fibrosis   pp1069 - 1070
Mark Ratner
doi:10.1038/nbt1114-1069

Takeda's second bet on DARTs   p1070
doi:10.1038/nbt1114-1070a

Gilead's interferon-free HCV combo approved   p1070
doi:10.1038/nbt1114-1070b

$675 million for MRSA antibiotic   p1070
doi:10.1038/nbt1114-1070c

Novo sets sights on obesity market with diabetes drug   pp1071 - 1072
Cormac Sheridan
doi:10.1038/nbt1114-1071

Dow's newly approved Enlist fights superweeds   p1073
doi:10.1038/nbt1114-1073b

J&J buys antiviral firm Alios   p1073
doi:10.1038/nbt1114-1073c

Illumina, Thermo Fisher build consortia to develop 'universal' cancer tests   pp1073 - 1074
Chris Morrison
doi:10.1038/nbt1114-1073a

Correction

Top

Correction   p1074
doi:10.1038/nbt1114-1074

News

Top

Anti-IL-5 biologics carve out severe-asthma niche   pp1075 - 1076
Elie Dolgin
doi:10.1038/nbt1114-1075

Mouse mAb patent revoked   p1076
doi:10.1038/nbt1114-1076a

EMA adopts transparency policy   p1076
doi:10.1038/nbt1114-1076b

Australia upholds BRCA1 gene patent   p1076
doi:10.1038/nbt1114-1076c

Big-cap buying bonanza trickles down to small biotech   pp1077 - 1078
Melanie Senior
doi:10.1038/nbt1114-1077

Data Page

Biotech on the bounce in 3Q14   p1079
Walter Yang
doi:10.1038/nbt.3068

Drug pipeline 3Q14   p1080
Laura DeFrancesco
doi:10.1038/nbt.3072

News Feature

Technology comes to typing   pp1081 - 1084
Jeffrey L Fox
doi:10.1038/nbt.3067
As mass spectrometry makes inroads into pathogen identification in the clinical laboratory, deep sequencing[mdash]even nanopore sequencing[mdash]is waiting in the wings. Jeffrey L. Fox investigates.

Bioentrepreneur

Top
Data Page

Top US universities and institutes for life sciences in 2013   p1085
Brady Huggett
doi:10.1038/nbt.3066

Opinion and Comment

Top
Correspondence

3D printing for the many, not the few   pp1086 - 1087
James N Fullerton, George C M Frodsham and Richard M Day
doi:10.1038/nbt.3056

Genetically engineered crops that fly under the US regulatory radar   pp1087 - 1091
Alex Camacho, Allen Van Deynze, Cecilia Chi-Ham and Alan B Bennett
doi:10.1038/nbt.3057

Screening cellular metabolic activity   p1092
Bachir el Debs, Ramesh Utharala and Christoph A Merten
doi:10.1038/nbt.3058

Gregory Stephanopoulos and colleagues reply to Screening cellular metabolic activity   pp1092 - 1093
doi:10.1038/nbt.3059

Features

Top
Patents

Antibody claims granted by the European Patent Office   pp1094 - 1098
Hilary van der Hoff
doi:10.1038/nbt.3054
A survey of the claims of antibody-related patents granted by the European Patent Office and a review of the type and scope of product claims granted for antibodies.

Recent patent applications in neural engineering   p1099
doi:10.1038/nbt.3075

News and Views

Top

Closing in on pancreatic beta cells   pp1100 - 1102
Neil Hanley
doi:10.1038/nbt.3064
Differentiation of human pluripotent stem cells toward pancreatic beta cells yields cells of increased maturity.

See also: Research by Rezania et al.

Antibacterials for any target   pp1102 - 1104
Lynn L Silver
doi:10.1038/nbt.3060
RNA-guided nucleases provide a strategy for killing specific bacterial species in complex populations.

See also: Research by Citorik et al. | Research by Bikard et al.

Making biology transparent   pp1104 - 1105
Burkhard Hockendorf, Luke D Lavis and Philipp J Keller
doi:10.1038/nbt.3061
The molecular and cellular architecture of the organs in a whole mouse is revealed through optical clearing.

Biotechnology
JOBS of the week
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Computational Biology

Top
Analysis

Comprehensive characterization of complex structural variations in cancer by directly comparing genome sequence reads   pp1106 - 1112
Valenti Moncunill, Santi Gonzalez, Silvia Bea, Lise O Andrieux, Itziar Salaverria et al.
doi:10.1038/nbt.3027
A new approach overcomes the hurdles of identifying large, complex structural variants in cancer genomes by directly comparing tumor and normal genome sequencing reads.

Research

Top
Perspective

Allosteric targeting of receptor tyrosine kinases   pp1113 - 1120
Frederik De Smet, Arthur Christopoulos and Peter Carmeliet
doi:10.1038/nbt.3028

Articles

Reversal of diabetes with insulin-producing cells derived in vitro from human pluripotent stem cells   pp1121 - 1133
Alireza Rezania, Jennifer E Bruin, Payal Arora, Allison Rubin, Irina Batushansky et al.
doi:10.1038/nbt.3033
A seven-stage protocol enables differentiation of human embryonic stem cells into cells similar to pancreatic beta cells.

See also: News and Views by Hanley

A bioinspired omniphobic surface coating on medical devices prevents thrombosis and biofouling   pp1134 - 1140
Daniel C Leslie, Anna Waterhouse, Julia B Berthet, Thomas M Valentin, Alexander L Watters et al.
doi:10.1038/nbt.3020
A non-stick surface coating makes medical devices anti-thrombogenic and resistant to biofilm growth.

Letters

Sequence-specific antimicrobials using efficiently delivered RNA-guided nucleases   pp1141 - 1145
Robert J Citorik, Mark Mimee and Timothy K Lu
doi:10.1038/nbt.3011
Delivery of CRISPR-Cas nucleases using bacteriophage enables targeted killing of microbes in a population

See also: News and Views by Silver

Exploiting CRISPR-Cas nucleases to produce sequence-specific antimicrobials   pp1146 - 1150
David Bikard, Chad W Euler, Wenyan Jiang, Philip M Nussenzweig, Gregory W Goldberg et al.
doi:10.1038/nbt.3043
Coupling the specificity of CRISPR-Cas nucleases and bacteriophage delivery enables exquisitely precise bacterial killing.

See also: News and Views by Silver

Differentiation of human pluripotent stem cells to cells similar to cord-blood endothelial colony-forming cells   pp1151 - 1157
Nutan Prasain, Man Ryul Lee, Sasidhar Vemula, Jonathan Luke Meador, Momoko Yoshimoto et al.
doi:10.1038/nbt.3048
Endothelial cells with properties of cord-blood endothelial colony-forming cells are generated from human pluripotent stem cells.

Resources

Comparative analyses of C4 and C3 photosynthesis in developing leaves of maize and rice   pp1158 - 1165
Lin Wang, Angelika Czedik-Eysenberg, Rachel A Mertz, Yaqing Si, Takayuki Tohge et al.
doi:10.1038/nbt.3019
Efforts to improve the efficiency of photosynthesis in crop plants will benefit from a resource of transcriptomic and metabolomic data on maize and rice.

Errata

Erratum: Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study   p1166
Sheng Li, Scott W Tighe, Charles M Nicolet, Deborah Grove, Shawn Levy et al.
doi:10.1038/nbt1114-1166a

Erratum: High-resolution metagenomics   p1166
Eran Mick and Rotem Sorek
doi:10.1038/nbt1114-1166b

Erratum: Public biotech 2013[mdash]the numbers   p1166
Stacy Lawrence and Riku Lahteenmaki
doi:10.1038/nbt1114-1166c

Corrigendum

Corrigendum: Harmonizing standards for producing clinical-grade therapies from pluripotent stem cells   p1166
Peter W Andrews, Joy Cavanagro, Robert Deans, Ellen Feigel, Ed Horowitz et al.
doi:10.1038/nbt1114-1166d

Careers and Recruitment

Top

Third-quarter biotech job picture   p1167
Michael Francisco
doi:10.1038/nbt.3065

People

People   p1168
doi:10.1038/nbt.3076

Top
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