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The ISME Journal - Table of Contents alert Volume 8 Issue 2

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The ISME Journal

TABLE OF CONTENTS

Volume 8, Issue 2 (February 2014)

In this issue
Original Articles
Erratum
Corrigendum

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Original Articles

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MICROBIAL POPULATION AND COMMUNITY ECOLOGY

Sympatric inhibition and niche differentiation suggest alternative coevolutionary trajectories among Streptomycetes

Linda L Kinkel, Daniel C Schlatter, Kun Xiao and Anita D Baines

ISME J 2014 8: 249-256; advance online publication, October 24, 2013; 10.1038/ismej.2013.175

Abstract | Full Text

Detection of a novel intracellular microbiome hosted in arbuscular mycorrhizal fungi

Alessandro Desirò, Alessandra Salvioli, Eddy L Ngonkeu, Stephen J Mondo, Sara Epis, Antonella Faccio, Andres Kaech, Teresa E Pawlowska and Paola Bonfante

ISME J 2014 8: 257-270; advance online publication, September 5, 2013; 10.1038/ismej.2013.151

Abstract | Full Text

MICROBE-MICROBE AND MICROBE-HOST INTERACTIONS

Potential role of viruses in white plague coral disease

Nitzan Soffer, Marilyn E Brandt, Adrienne MS Correa, Tyler B Smith and Rebecca Vega Thurber

ISME J 2014 8: 271-283; advance online publication, August 15, 2013; 10.1038/ismej.2013.137

Abstract | Full Text

Rapid genotypic change and plasticity in arbuscular mycorrhizal fungi is caused by a host shift and enhanced by segregation

Caroline Angelard, Colby J Tanner, Pierre Fontanillas, Hélène Niculita-Hirzel, Frédéric Masclaux and Ian R Sanders

ISME J 2014 8: 284-294; advance online publication, September 12, 2013; 10.1038/ismej.2013.154

Abstract | Full Text

High-fat diet alters gut microbiota physiology in mice

Hannelore Daniel, Amin Moghaddas Gholami, David Berry, Charles Desmarchelier, Hannes Hahne, Gunnar Loh, Stanislas Mondot, Patricia Lepage, Michael Rothballer, Alesia Walker, Christoph Böhm, Mareike Wenning, Michael Wagner, Michael Blaut, Philippe Schmitt-Kopplin, Bernhard Kuster, Dirk Haller and Thomas Clavel

ISME J 2014 8: 295-308; advance online publication, September 12, 2013; 10.1038/ismej.2013.155

Abstract | Full Text

Bacterial diversity associated with the tunic of the model chordate Ciona intestinalis

Leah C Blasiak, Stephen H Zinder, Daniel H Buckley and Russell T Hill

ISME J 2014 8: 309-320; advance online publication, September 19, 2013; 10.1038/ismej.2013.156

Abstract | Full Text

Attributing functions to ectomycorrhizal fungal identities in assemblages for nitrogen acquisition under stress

Rodica Pena and Andrea Polle

ISME J 2014 8: 321-330; advance online publication, September 12, 2013; 10.1038/ismej.2013.158

Abstract | Full Text

Linkage between bacterial and fungal rhizosphere communities in hydrocarbon-contaminated soils is related to plant phylogeny

Terrence H Bell, Saad El-Din Hassan, Aurélien Lauron-Moreau, Fahad Al-Otaibi, Mohamed Hijri, Etienne Yergeau and Marc St-Arnaud

ISME J 2014 8: 331-343; advance online publication, August 29, 2013; 10.1038/ismej.2013.149

Abstract | Full Text

Microbial expression profiles in the rhizosphere of willows depend on soil contamination

Etienne Yergeau, Sylvie Sanschagrin, Christine Maynard, Marc St-Arnaud and Charles W Greer

ISME J 2014 8: 344-358; advance online publication, September 26, 2013; 10.1038/ismej.2013.163

Abstract | Full Text

Loline alkaloid production by fungal endophytes of Fescue species select for particular epiphytic bacterial microflora

Elizabeth Roberts and Steven Lindow

ISME J 2014 8: 359-368; advance online publication, October 10, 2013; 10.1038/ismej.2013.170

Abstract | Full Text

EVOLUTIONARY GENETICS

The (d)evolution of methanotrophy in the Beijerinckiaceae—a comparative genomics analysis

Ivica Tamas, Angela V Smirnova, Zhiguo He and Peter F Dunfield

ISME J 2014 8: 369-382; advance online publication, August 29, 2013; 10.1038/ismej.2013.145

Abstract | Full Text

INTEGRATED GENOMICS AND POST-GENOMICS APPROACHES IN MICROBIAL ECOLOGY

Genome sequencing of a single cell of the widely distributed marine subsurface Dehalococcoidia, phylum Chloroflexi

Kenneth Wasmund, Lars Schreiber, Karen G Lloyd, Dorthe G Petersen, Andreas Schramm, Ramunas Stepanauskas, Bo Barker Jørgensen and Lorenz Adrian

ISME J 2014 8: 383-397; advance online publication, August 22, 2013; 10.1038/ismej.2013.143

Abstract | Full Text

Reconstructing an ancestral genotype of two hexachlorocyclohexane-degrading Sphingobium species using metagenomic sequence data OPEN

Naseer Sangwan, Helianthous Verma, Roshan Kumar, Vivek Negi, Simon Lax, Paramjit Khurana, Jitendra P Khurana, Jack A Gilbert and Rup Lal

ISME J 2014 8: 398-408; advance online publication, September 12, 2013; 10.1038/ismej.2013.153

Abstract | Full Text

GEOMICROBIOLOGY AND MICROBIAL CONTRIBUTIONS TO GEOCHEMICAL CYCLES

Coordinated transporter activity shapes high-affinity iron acquisition in cyanobacteria

Chana Kranzler, Hagar Lis, Omri M Finkel, Georg Schmetterer, Yeala Shaked and Nir Keren

ISME J 2014 8: 409-417; advance online publication, October 3, 2013; 10.1038/ismej.2013.161

Abstract | Full Text

MICROBIAL ECOLOGY AND FUNCTIONAL DIVERSITY OF NATURAL HABITATS

Active eukaryotes in microbialites from Highborne Cay, Bahamas, and Hamelin Pool (Shark Bay), Australia

Virginia P Edgcomb, Joan M Bernhard, Roger E Summons, William Orsi, David Beaudoin and Pieter T Visscher

ISME J 2014 8: 418-429; advance online publication, August 8, 2013; 10.1038/ismej.2013.130

Abstract | Full Text

The microbial gene diversity along an elevation gradient of the Tibetan grassland

Yunfeng Yang, Ying Gao, Shiping Wang, Depeng Xu, Hao Yu, Linwei Wu, Qiaoyan Lin, Yigang Hu, Xiangzhen Li, Zhili He, Ye Deng and Jizhong Zhou

ISME J 2014 8: 430-440; advance online publication, August 29, 2013; 10.1038/ismej.2013.146

Abstract | Full Text

Community shifts of actively growing lake bacteria after N-acetyl-glucosamine addition: improving the BrdU-FACS method

Yuya Tada and Hans-Peter Grossart

ISME J 2014 8: 441-454; advance online publication, August 29, 2013; 10.1038/ismej.2013.148

Abstract | Full Text

Genomic properties of Marine Group A bacteria indicate a role in the marine sulfur cycle OPEN

Jody J Wright, Keith Mewis, Niels W Hanson, Kishori M Konwar, Kendra R Maas and Steven J Hallam

ISME J 2014 8: 455-468; advance online publication, September 12, 2013; 10.1038/ismej.2013.152

Abstract | Full Text

Kin recognition in Drosophila: the importance of ecology and gut microbiota

Anne Lizé, Raegan McKay and Zenobia Lewis

ISME J 2014 8: 469-477; advance online publication, September 12, 2013; 10.1038/ismej.2013.157

Abstract | Full Text

Making a living while starving in the dark: metagenomic insights into the energy dynamics of a carbonate cave

Marianyoly Ortiz, Antje Legatzki, Julia W Neilson, Brandon Fryslie, William M Nelson, Rod A Wing, Carol A Soderlund, Barry M Pryor and Raina M Maier

ISME J 2014 8: 478-491; advance online publication, September 12, 2013; 10.1038/ismej.2013.159

Abstract | Full Text

Erratum

Top

Microbial individuality in the natural environment

M Ackermann

ISME J 2014 8: 492; 10.1038/ismej.2013.184

Full Text

Corrigendum

Top

Sympatric inhibition and niche differentiation suggest alternative coevolutionary trajectories among Streptomycetes

Linda L Kinkel, Daniel C Schlatter, Kun Xiao and Anita D Baines

ISME J 2014 8: 492; 10.1038/ismej.2013.213

Full Text

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