Wednesday, December 11, 2013

The EMBO Journal - Table of Contents alert Volume 32 Issue 24

The EMBO Journal

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TABLE OF CONTENTS

11 December 2013 | Volume 32, Issue 24

Commentary
Obituary
Have you seen?
Articles

Recommend to your library
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EMBO Press launches this month, uniting the policies and initiatives of The EMBO Journal, EMBO reports, EMBO Molecular Medicine and Molecular Systems Biology. Our vision is to make science publishing more transparent, and to transform articles into data-enriched, accessible records of research. The journals continue to select important work from the global life sciences community for publication. 
 

Commentary

Top

European stem cell research in legal shackles

This commentary critically discusses potential legal uncertainty that may impact the patentability/translation of particularly stem cell-based therapeutics.

Myrthe G Nielen, Sybe A de Vries and Niels Geijsen

The EMBO Journal (2013), 32, 3107 - 3111; 10.1038/emboj.2013.249

Abstract | Full text | PDF

Published online: 22 November 2013

Obituary

Top

Remembering Michael S Neuberger (1953–2013)

Antonino Cattaneo and Roberto Sitia

The EMBO Journal (2013), 32, 3112 - 3113; 10.1038/emboj.2013.251

Full text | PDF

Published online: 11 December 2013

Have you seen?

Top

Cohesin’s role as an active chromatin domain anchorage revealed

High-resolution chromatin conformation capture combined with functional methods reveal a novel cohesin function as critical determinant of the chromosomal architecture.

Christine Feig and Duncan T Odom

The EMBO Journal (2013), 32, 3114 - 3115; 10.1038/emboj.2013.248

Abstract | Full text | PDF | Related article

Published online: 22 November 2013

Amphisomes: out of the autophagosome shadow?

Amphisomes are intermediate organelles formed during autophagy. Stappenbeck and colleagues now report that amphisome-like compartments regulate mucin secretion in goblet cells.

Jana Sanchez-Wandelmer and Fulvio Reggiori

The EMBO Journal (2013), 32, 3116 - 3118; 10.1038/emboj.2013.246

Abstract | Full text | PDF | Related article

Published online: 12 November 2013

Articles

Top

Cohesin-mediated interactions organize chromosomal domain architecture  EMBO Open

Chromosomal compartmentalization has been recognized as important for genome function. High-resolution techniques such as Hi-C, ChIP- and 4C-seq offer novel insights into cohesin’s dynamic role in shaping the nuclear architecture.

Sevil Sofueva, Eitan Yaffe, Wen-Ching Chan, Dimitra Georgopoulou, Matteo Vietri Rudan, Hegias Mira-Bontenbal, Steven M Pollard, Gary P Schroth, Amos Tanay and Suzana Hadjur

The EMBO Journal (2013), 32, 3119 - 3129; 10.1038/emboj.2013.237

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 01 November 2013

Autophagy proteins control goblet cell function by potentiating reactive oxygen species production

In vivo findings on mucus secretion in the colon illustrate how autophagy proteins can control secretion mechanisms via ROS generation.

Khushbu K Patel, Hiroyuki Miyoshi, Wandy L Beatty, Richard D Head, Nicole P Malvin, Ken Cadwell, Jun-Lin Guan, Tatsuya Saitoh, Shizuo Akira, Per O Seglen, Mary C Dinauer, Herbert W Virgin and Thaddeus S Stappenbeck

The EMBO Journal (2013), 32, 3130 - 3144; 10.1038/emboj.2013.233

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 01 November 2013

Transcriptome sequencing during mouse brain development identifies long non-coding RNAs functionally involved in neurogenic commitment

Comprehensive gene-expression profiling of neural stem cells, differentiating progenitors and newborn neurons identify lncRNAs as novel players in corticogenesis.

Julieta Aprea, Silvia Prenninger, Martina Dori, Tanay Ghosh, Laura Sebastian Monasor, Elke Wessendorf, Sara Zocher, Simone Massalini, Dimitra Alexopoulou, Mathias Lesche, Andreas Dahl, Matthias Groszer, Michael Hiller and Federico Calegari

The EMBO Journal (2013), 32, 3145 - 3160; 10.1038/emboj.2013.245

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 15 November 2013

Isogenic human pluripotent stem cell pairs reveal the role of a KCNH2 mutation in long-QT syndrome  EMBO Open

Isogenic pairs of patient-derived iPS- and ES-cell lines reveal the molecular problems contributing to cardiac arrest in long-QT syndrome.

Milena Bellin, Simona Casini, Richard P Davis, Cristina D'Aniello, Jessica Haas, Dorien Ward-van Oostwaard, Leon G J Tertoolen, Christian B Jung, David A Elliott, Andrea Welling, Karl-Ludwig Laugwitz, Alessandra Moretti and Christine L Mummery

The EMBO Journal (2013), 32, 3161 - 3175; 10.1038/emboj.2013.240

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 08 November 2013

Divergent roles of HDAC1 and HDAC2 in the regulation of epidermal development and tumorigenesis  EMBO Open

Dose-dependent deletion of HDAC1 and -2 in the mouse epidermis reveals non-redundant functions in postnatal skin homeostasis. The novel tumour suppressive function of HDAC1 should caution the application of HDAC inhibitors as therapeutics.

Mircea Winter, Mirjam A Moser, Dominique Meunier, Carina Fischer, Georg Machat, Katharina Mattes, Beate M Lichtenberger, Reinhard Brunmeir, Simon Weissmann, Christina Murko, Christina Humer, Tina Meischel, Gerald Brosch, Patrick Matthias, Maria Sibilia and Christian Seiser

The EMBO Journal (2013), 32, 3176 - 3191; 10.1038/emboj.2013.243

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 15 November 2013

Acetylation of p53 stimulates miRNA processing and determines cell survival following genotoxic stress

Genotoxic agents induce hMOF-dependent acetylation of p53, enhancing association with the Microprocessor complex to facilitate miRNA biogenesis. This novel pathway is required to elicit p53-dependent apoptosis.

Jonathan Chang, Brandi N Davis-Dusenbery, Risa Kashima, Xuan Jiang, Nisha Marathe, Roberto Sessa, Justin Louie, Wei Gu, Giorgio Lagna and Akiko Hata

The EMBO Journal (2013), 32, 3192 - 3205; 10.1038/emboj.2013.242

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 12 November 2013

USP10 inhibits genotoxic NF-κB activation by MCPIP1-facilitated deubiquitination of NEMO

The DNA damage-inducible protein MCPIP1 teams up with a deubiquitinating enzyme to cleave linear ubiquitin chains off NEMO.

Jixiao Niu, Yuling Shi, Jingyan Xue, Ruidong Miao, Shengping Huang, Tianyi Wang, Jiong Wu, Mingui Fu and Zhao-Hui Wu

The EMBO Journal (2013), 32, 3206 - 3219; 10.1038/emboj.2013.247

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 22 November 2013

Large cargo transport by nuclear pores: implications for the spatial organization of FG-nucleoporins

Nuclear transport receptors (NTRs) engage in multivalent interactions with nuclear pore complexes (NPCs). Single-molecule fluorescence microscopy and quantitative modelling suggest that multiple NTRs are required for translocation of large cargo through the NPC.

Li-Chun Tu, Guo Fu, Anton Zilman and Siegfried M Musser

The EMBO Journal (2013), 32, 3220 - 3230; 10.1038/emboj.2013.239

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 08 November 2013

SERCA mutant E309Q binds two Ca2+ ions but adopts a catalytically incompetent conformation

The sarco(endo)plasmic reticulum Ca2+ ATPase (SERCA) couples ATP hydrolysis to Ca2+ transport. A crystal structure shows that the E309Q mutant allows normal Ca2+ binding but disrupts long-range communication between ATP hydrolysis and gating.

Johannes D Clausen, Maike Bublitz, Bertrand Arnou, Cédric Montigny, Christine Jaxel, Jesper Vuust Møller, Poul Nissen, Jens Peter Andersen and Marc le Maire

The EMBO Journal (2013), 32, 3231 - 3243; 10.1038/emboj.2013.250

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 22 November 2013

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