The ISME Journal - Table of Contents alert Volume 7 Issue 12

TABLE OF CONTENTS Volume 7, Issue 12 (December 2013) In this issue Commentary Original Articles Corrigendum Also new AOP Sign up for e-alerts Recommend to your library Web feed Subscribe Advertisement Stay connected to The ISME Journal Follow us on Twitter and Facebook for all the latest updates. Don't miss out! Commentary Top Functional relationship between Campylobacter concisus and the stomach ecosystem in health and disease Nadeem O Kaakoush, Si Ming Man and Hazel M Mitchell ISME J 2013 7: 2245-2247; advance online publication, July 4, 2013; 10.1038/ismej.2013.115 Full Text Original Articles Top MICROBIAL POPULATION AND COMMUNITY ECOLOGY Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants Thomas R Turner, Karunakaran Ramakrishnan, John Walshaw, Darren Heavens, Mark Alston, David Swarbreck, Anne Osbourn, Alastair Grant and Philip S Poole ISME J 2013 7: 2248-2258; advance online publication, July 18, 2013; 10.1038/ismej.2013.119 Abstract | Full Text Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight Cheryl-Emiliane T Chow, Rohan Sachdeva, Jacob A Cram, Joshua A Steele, David M Needham, Anand Patel, Alma E Parada and Jed A Fuhrman ISME J 2013 7: 2259-2273; advance online publication, July 18, 2013; 10.1038/ismej.2013.122 Abstract | Full Text MICROBE-MICROBE AND MICROBE-HOST INTERACTIONS You are what you talk: quorum sensing induces individual morphologies and cell division modes in Dinoroseobacter shibae Diana Patzelt, Hui Wang, Ina Buchholz, Manfred Rohde, Lothar Gröbe, Silke Pradella, Alexander Neumann, Stefan Schulz, Steffi Heyber, Karin Münch, Richard Münch, Dieter Jahn, Irene Wagner-Döbler and Jürgen Tomasch ISME J 2013 7: 2274-2286; advance online publication, July 4, 2013; 10.1038/ismej.2013.107 Abstract | Full Text Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges Janine Kamke, Alexander Sczyrba, Natalia Ivanova, Patrick Schwientek, Christian Rinke, Kostas Mavromatis, Tanja Woyke and Ute Hentschel ISME J 2013 7: 2287-2300; advance online publication, July 11, 2013; 10.1038/ismej.2013.111 Abstract | Full Text INTEGRATED GENOMICS AND POST-GENOMICS APPROACHES IN MICROBIAL ECOLOGY Comparative genomics of two ‘Candidatus Accumulibacter’ clades performing biological phosphorus removal Jason J Flowers, Shaomei He, Stephanie Malfatti, Tijana Glavina del Rio, Susannah G Tringe, Philip Hugenholtz and Katherine D McMahon ISME J 2013 7: 2301-2314; advance online publication, July 25, 2013; 10.1038/ismej.2013.117 Abstract | Full Text Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill Adam R Rivers, Shalabh Sharma, Susannah G Tringe, Jeffrey Martin, Samantha B Joye and Mary Ann Moran ISME J 2013 7: 2315-2329; advance online publication, August 1, 2013; 10.1038/ismej.2013.129 Abstract | Full Text Two-stage microbial community experimental design Timothy L Tickle, Nicola Segata, Levi Waldron, Uri Weingart and Curtis Huttenhower ISME J 2013 7: 2330-2339; advance online publication, August 15, 2013; 10.1038/ismej.2013.139 Abstract | Full Text GEOMICROBIOLOGY AND MICROBIAL CONTRIBUTIONS TO GEOCHEMICAL CYCLES Programmed cell death in the marine cyanobacterium Trichodesmium mediates carbon and nitrogen export Edo Bar-Zeev, Itamar Avishay, Kay D Bidle and Ilana Berman-Frank ISME J 2013 7: 2340-2348; advance online publication, July 25, 2013; 10.1038/ismej.2013.121 Abstract | Full Text MICROBIAL ECOLOGY AND FUNCTIONAL DIVERSITY OF NATURAL HABITATS Sulfur oxidizers dominate carbon fixation at a biogeochemical hot spot in the dark ocean Timothy E Mattes, Brook L Nunn, Katharine T Marshall, Giora Proskurowski, Deborah S Kelley, Orest E Kawka, David R Goodlett, Dennis A Hansell and Robert M Morris ISME J 2013 7: 2349-2360; advance online publication, July 11, 2013; 10.1038/ismej.2013.113 Abstract | Full Text Bacterial structures and ecosystem functions in glaciated floodplains: contemporary states and potential future shifts Remo Freimann, Helmut Bürgmann, Stuart EG Findlay and Christopher T Robinson ISME J 2013 7: 2361-2373; advance online publication, July 11, 2013; 10.1038/ismej.2013.114 Abstract | Full Text Microbial and viral metagenomes of a subtropical freshwater reservoir subject to climatic disturbances Ching-Hung Tseng, Pei-Wen Chiang, Fuh-Kwo Shiah, Yi-Lung Chen, Jia-Rong Liou, Ting-Chang Hsu, Suhinthan Maheswararajah, Isaam Saeed, Saman Halgamuge and Sen-Lin Tang ISME J 2013 7: 2374-2386; advance online publication, July 11, 2013; 10.1038/ismej.2013.118 Abstract | Full Text Vampires in the oceans: predatory cercozoan amoebae in marine habitats Cédric Berney, Sarah Romac, Frédéric Mahé, Sébastien Santini, Raffaele Siano and David Bass ISME J 2013 7: 2387-2399; advance online publication, July 18, 2013; 10.1038/ismej.2013.116 Abstract | Full Text Genome-wide analysis of lysine catabolism in bacteria reveals new connections with osmotic stress resistance Izabella AP Neshich, Eduardo Kiyota and Paulo Arruda ISME J 2013 7: 2400-2410; advance online publication, July 25, 2013; 10.1038/ismej.2013.123 Abstract | Full Text Nitrogen fixation in distinct microbial niches within a chemoautotrophy-driven cave ecosystem OPEN Mahesh S Desai, Karoline Assig and Sharmishtha Dattagupta ISME J 2013 7: 2411-2423; advance online publication, August 8, 2013; 10.1038/ismej.2013.126 Abstract | Full Text Corrigendum Top Significant CO2 fixation by small prymnesiophytes in the subtropical and tropical northeast Atlantic Ocean Ludwig Jardillier, Mikhail V Zubkov, John Pearman and David J Scanlan ISME J 2013 7: 2424; 10.1038/ismej.2013.166 Full Text Natureevents is a fully searchable, multi-disciplinary database designed to maximise exposure for events organisers. 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