| | | Can't view this email? Click here to view in your browser. | | | | | Volume 502 Number 7472 | | | | nature | | The science that matters. Every week. | | | | | | | | |
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| | | | | | Specials - Insight: Transcription and epigenetics | | | | | | Interplay between signal transduction pathways, transcription factors and chromatin packaging dictates the gene expression pattern of a cell, which must be relatively stably maintained once an organism fully develops. Five specially commissioned reviews in this Insight supplement explore how transcriptional states are regulated during development and disease. ▼ more | | | | | | | | | | | | | | Odour receptors and neurons for DEET and new insect repellents | | DEET, or N,N-diethyl-meta-toluamide, has been the main commercial insect repellent for more than 60 years. But its high cost, reports of spreading DEET resistance and the fact that it dissolves plastics mean that researchers are seeking alternatives. This study identifies key components that mediate DEET's effects: a highly conserved receptor (Ir40a protein) and a population of sensory neurons found in a pit-like structure in the insect antenna. And the good news is that there are a number of chemicals, either natural or already approved for human use, that stimulate the same neuronal circuit as DEET. The prospects that a cheap and nontoxic alternative to DEET might be found are therefore good. | | | | | | | | | | | | | | A galaxy rapidly forming stars 700 million years after the Big Bang at redshift 7.51 | | The discovery of the most distant spectroscopically confirmed galaxy is reported in Nature this week. The galaxy existed when the Universe was only 680 million years old. Although some more-distant candidate galaxies have been detected, they have not yet been confirmed. The galaxy has an emission line that can be confirmed at a redshift of 7.51, placing it at an epoch 700 million years after the Big Bang. Its colours are consistent with a significant metal content, and it has a surprisingly high star formation rate of about 330 solar masses per year, more than 100-fold greater than that seen in the Milky Way. The authors suggest that there may be many more such sites of intense star formation in the early Universe than previously expected. | | | | | | | | | | | | | | | Call for entries! Entry deadline: 15 January 2014 | | | | | | | | | | | | | | | | Microbial production of short-chain alkanes | | High oil prices are fuelling extensive research on the production of sustainable biofuels from renewable resources. Engineered microbes are one option, but until now microbes have not produced gasoline, a mix of light (C4 to C12) liquid hydrocarbons, in part because cellular metabolism favours the production of long-chain fatty acids. Now new Escherichia coli strains have been engineered to produce free fatty acids, fatty esters, fatty alcohols and crucially, short-chain alkanes including the gasoline components nonane and decane. | | | | | | | | | | | | | | | | In this week's podcast: decoding brain activity to predict what you're seeing, remembering or even dreaming, and the truth about the infamous tyrant Tyrannosaurus rex. In our latest video feature neuroscientists use scanning techniques to tell which areas of the brain are active during different tasks. Now by looking deeper into these blobs, they can decode what a person is seeing, remembering and even dreaming. | | | | | | | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | High maintenance ▶ | | | | The next president of the European Research Council will face the dual challenge of preserving the agency's reputation for excellence while trying to address funding inequalities. | | | | | | | | | | | | End harassment ▶ | | | | Sexual harassment is a stain on science — and we must all take a stand against it. | | | | | | | | | | | | Magnetic map ▶ | | | | Chemists present a way to infer the enigmatic temperature variations inside a reactor. | | | | | | | | | | | | | | | | | | | | | | | | Seven days: 18–24 October 2013 ▶ | | | | The week in science: Spain bails out its largest scientific body, Russian lake yields massive meteorite, and the United Nations appoints 26 science advisers. | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Brain decoding: Reading minds ▶ | | | | By scanning blobs of brain activity, scientists may be able to decode people's thoughts, their dreams and even their intentions. | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Physics: Science under the Nazis ▶ | | | | Robert P. Crease applauds the story of three great physicists who struggled to maintain their integrity during the Third Reich. | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
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| | | | | EMBO Courses & Workshops 2014 More than 90 conferences, workshops, symposia, practical courses & lecture courses announced. Subscribe to e-news to receive reminders of registration & abstract submission deadlines. | | | | | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Crystal structure of the 14-subunit RNA polymerase I ▶ | | | | Carlos FernĂĄndez-Tornero, MarĂa Moreno-Morcillo, Umar J. Rashid et al. | | | | RNA polymerase (Pol) I transcribes ribosomal RNA that is critically required for ribosome assembly, and the enzyme is a major determinant of protein biosynthesis and cell growth; here the crystal structure of the complete 14-subunit Pol I from yeast is determined, providing insights into its unique architecture and the possible functional roles of its components. | | | | | | | | | | | | RNA polymerase I structure and transcription regulation ▶ | | | | Christoph Engel, Sarah Sainsbury, Alan C. Cheung et al. | | | | The crystal structure of the complete 14-subunit RNA polymerase (Pol) I from yeast is determined, providing insights into its unique architecture and the possible functional roles of its components. | | | | | | | | | | | | | | | | | | | | Antigen-specific B-cell receptor sensitizes B cells to infection by influenza virus ▶ | | | | Stephanie K. Dougan, Joseph Ashour, Roos A. Karssemeijer et al. | | | | Transnuclear mice are generated from B cells with a receptor specific for the haemagglutinin of influenza A virus; the authors show that influenza virus can infect and deplete haemagglutinin-specific B cells in the lung, which might confer a replicative advantage to the virus and allow it to evade an early neutralizing response. | | | | | | | | | | | | Structural basis for ligase-specific conjugation of linear ubiquitin chains by HOIP ▶ | | | | Benjamin Stieglitz, Rohini R. Rana, Marios G. Koliopoulos et al. | | | | The crystal structure of a complex between the catalytic core of the HOIP subunit of the E3 ligase LUBAC and ubiquitin is reported, yielding insight into the ubiquitin transfer reaction and explaining how HOIP is capable of synthesizing linear ubiquitin chains with high specificity. | | | | | | | | | | | | A high-resolution map of the three-dimensional chromatin interactome in human cells ▶ | | | | Fulai Jin, Yan Li, Jesse R. Dixon et al. | | | | A novel approach to analyse high-depth Hi-C data provides a comprehensive chromatin interaction map at approximately 5–10 kb resolution in human fibroblasts; this reveals that TNF-α-responsive enhancers are already in contact with target promoters before signalling and that this chromatin looping is a strong predictor of gene induction. | | | | | | | | | | | | Single-molecule fluorescence probes dynamics of barrier crossing ▶ | | | | Hoi Sung Chung, William A. Eaton | | | | Here the Kramers diffusion coefficient and free-energy barrier are characterized for the first time through single-molecule fluorescence measurements of the temperature- and viscosity-dependence of the transition path time for protein folding. | | | | | | | | | | | | DMSP biosynthesis by an animal and its role in coral thermal stress response ▶ | | | | Jean-Baptiste Raina, Dianne M. Tapiolas, Sylvain ForĂȘt et al. | | | | Until now, dimethylsulphoniopropionate (DMSP), an important component in the sulphur cycle, has been thought to be produced solely by algae and some plants; however, this study shows that the coral animal also produces DMSP, in addition to that produced by the coral's algal symbiont, with potential implications for the sulphur cycle and its climatic consequences as corals and their symbionts are affected by global change. | | | | | | | | | | | | Differential L1 regulation in pluripotent stem cells of humans and apes ▶ | | | | Maria C. N. Marchetto, Iñigo Narvaiza, Ahmet M. Denli et al. | | | | Induced pluripotent stem-cell characterization reveals phenotypical differences between humans and non-human primates (NHPs): gene expression analysis shows differences in the regulation of long interspersed element-1 (L1) transposons, and in the expression of L1-restricting genes APOBEC3B and PIWIL2, correlating with higher L1 mobility in NHPs; this indicates that L1 mobility differences may have differentially shaped the human and NHP genomes. | | | | | | | | | | | | Structure of the SecY channel during initiation of protein translocation ▶ | | | | Eunyong Park, Jean-François MĂ©nĂ©tret, James C. Gumbart et al. | | | | Newly synthesized proteins are targeted to the SecY protein-conducting channel for translocation across the membrane; here, cryo-electron microscopy structures of inactive and active ribosome–channel complexes are presented, revealing that ribosome binding does not result in major structural changes to transmembrane regions of the channel, and that stable channel opening requires loop insertion of the translocating nascent chain. | | | | | | | | | | | | | | | | Odour receptors and neurons for DEET and new insect repellents ▶ | | | | Pinky Kain, Sean Michael Boyle, Sana Khalid Tharadra et al. | | | | The olfactory receptors and neurons that recognize the insect repellent DEET have been identified in Drosophila melanogaster, enabling identification of new insect repellents in a chemical screen and offering another research avenue against diseases transmitted by insects. | | | | | | | | | | | | Spatial organization within a niche as a determinant of stem-cell fate ▶ | | | | Panteleimon Rompolas, Kailin R. Mesa, Valentina Greco | | | | By combining lineage tracing with intravital microscopy, the position of a stem cell within its extended mouse hair follicle niche is shown to control its long-term fate and behaviour; laser ablation to remove restricted cell populations shows that bulge stem cells are dispensable for hair regeneration, and non-hair epithelial cells may change their fate to compensate and sustain hair growth. | | | | | | | | | | | | The structure of the box C/D enzyme reveals regulation of RNA methylation ▶ | | | | Audrone Lapinaite, Bernd Simon, Lars Skjaerven et al. | | | | RNAs undergo many types of post-transcriptional modification, including methylation of ribosomal RNAs; here the structure of the archaeal box C/D ribonucleoprotein complex bound to substrate RNA is determined, showing that the two methylation guide sequences exist in different contexts and revealing sequential regulation of methylation at the two sites. | | | | | | | | | | | | The origin of conodonts and of vertebrate mineralized skeletons ▶ | | | | Duncan J. E. Murdock, Xi-Ping Dong, John E. Repetski et al. | | | | A study of tooth evolution comparing fossil euconodonts and paraconodonts using X-rays reveals that paraconodonts do not contain vertebrate hard tissues like enamel and dentine and therefore euconodont and vertebrate teeth arose independently and convergently. | | | | | | | | | | | | A diurnal serum lipid integrates hepatic lipogenesis and peripheral fatty acid use ▶ | | | | Sihao Liu, Jonathan D. Brown, Kristopher J. Stanya et al. | | | | How the liver communicates with peripheral tissues to achieve metabolic homeostasis is poorly defined; here the authors show that the nuclear hormone receptor PPARÎŽ regulates de novo lipogenesis in the liver and orchestrates fat use by muscle via a circulating lipid. | | | | | | | | | | | | | | | | Human MX2 is an interferon-induced post-entry inhibitor of HIV-1 infection ▶ | | | | Caroline Goujon, Olivier MoncorgĂ©, HĂ©lĂšne Bauby et al. | | | | Here, a protein known as MX2 is shown to be a major effector of interferon-α-mediated resistance to HIV-1 infection: susceptibility of the HIV-1 virus to inhibition by MX2 is dictated by the Capsid region of the viral Gag protein, and inhibition occurs at a late post-entry step of infection. | | | | | | | | | | | | | | | | αTAT1 catalyses microtubule acetylation at clathrin-coated pits ▶ | | | | Guillaume Montagnac, Vannary Meas-Yedid, Marie Irondelle et al. | | | | In eukaryotic cells, a subset of microtubules undergoes acetylation, resulting in stabilization: here, clathrin-coated pits are shown to control microtubule acetylation through a direct interaction between the α-tubulin acetyltransferase αTAT1 and the clathrin adaptor AP2, promoting directional cell migration. | | | | | | | | | | | | Microbial production of short-chain alkanes ▶ | | | | Yong Jun Choi, Sang Yup Lee | | | | Microbes have already been engineered to produce diesel fuels, and now the microbial production of components of petrol (gasoline) including short-chain alkanes has been achieved using Escherichia coli strains metabolically engineered with components of fatty acid biosynthesis pathways. | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| | | | | Sunday, 3rd November at 2:00pm in Room 259B The session will cover not only the process of publishing in Frontiers in Public Health, but will also look at the impact of open access publishing on the field of Public Health. This session is free and open to all delegates. | | | | | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Single-molecule fluorescence probes dynamics of barrier crossing ▶ | | | | Hoi Sung Chung, William A. Eaton | | | | Here the Kramers diffusion coefficient and free-energy barrier are characterized for the first time through single-molecule fluorescence measurements of the temperature- and viscosity-dependence of the transition path time for protein folding. | | | | | | | | | | | | | | | | Thermal maps of gases in heterogeneous reactions ▶ | | | | Nanette N. Jarenwattananon, Stefan Glöggler, Trenton Otto et al. | | | | A technique of NMR thermometry that relies on the inverse relationship between NMR linewidths and temperature can be used to map non-invasively the gas temperatures inside catalytic reactors, offering unprecedented capabilities for testing the approximations used in reactor modelling. | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Colloidal assembly directed by virtual magnetic moulds ▶ | | | | Ahmet F. Demirörs, Pramod P. Pillai, Bartlomiej Kowalczyk et al. | | | | Magnetic fields micropatterned within a paramagnetic fluid can simultaneously trap and position both magnetic and non-magnetic microparticles, the latter including live bacteria. | | | | | | | | | | | | Single-molecule fluorescence probes dynamics of barrier crossing ▶ | | | | Hoi Sung Chung, William A. Eaton | | | | Here the Kramers diffusion coefficient and free-energy barrier are characterized for the first time through single-molecule fluorescence measurements of the temperature- and viscosity-dependence of the transition path time for protein folding. | | | | | | | | | | | | | | | | | | | | | | | | Interface superconductor with gap behaviour like a high-temperature superconductor ▶ | | | | C. Richter, H. Boschker, W. Dietsche et al. | | | | The density of states in a two-dimensional superconductor has an energy gap that behaves analogously to that in a high-transition-temperature copper oxide superconductor as a function of charge carrier density, suggesting that such behaviour could be a general property of two-dimensional superconductivity. | | | | | | | | | | | | | | | | Thermal maps of gases in heterogeneous reactions ▶ | | | | Nanette N. Jarenwattananon, Stefan Glöggler, Trenton Otto et al. | | | | A technique of NMR thermometry that relies on the inverse relationship between NMR linewidths and temperature can be used to map non-invasively the gas temperatures inside catalytic reactors, offering unprecedented capabilities for testing the approximations used in reactor modelling. | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Brief Communications Arising | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | DMSP biosynthesis by an animal and its role in coral thermal stress response ▶ | | | | Jean-Baptiste Raina, Dianne M. Tapiolas, Sylvain ForĂȘt et al. | | | | Until now, dimethylsulphoniopropionate (DMSP), an important component in the sulphur cycle, has been thought to be produced solely by algae and some plants; however, this study shows that the coral animal also produces DMSP, in addition to that produced by the coral's algal symbiont, with potential implications for the sulphur cycle and its climatic consequences as corals and their symbionts are affected by global change. | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | UCSD Clinical and Translational Research Institute and Nature Medicine present: Bench to Bedside 2013: Cancer Therapeutics November 4-6, 2013 Estancia La Jolla Hotel La Jolla, CA, USA Click here for more information or to register for this conference today! | | | | | |
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| | | | | | | | | | | | | | | | | | | | | | | | A good investment ▶ | | | | Success involves acknowledging past accomplishments as well as looking ahead to future value, says Yoshimi Rii. | | | | | | | | | | | | Careers related news & comment | | | | | | | | | | | | | | | | | | | | | |  naturejobs.com Science jobs of the week | | | | | | | | | | | | | | | | | | | | No matter what your career stage, student, postdoc or senior scientist, you will find articles on naturejobs.com to help guide you in your science career. Keep up-to-date with the latest sector trends, vote in our reader poll and sign-up to receive the monthly Naturejobs newsletter. | | | | | | | | | | • Natureevents Directory featured events | | | | | | | | | |  natureevents directory featured events | | | | | | | | | | Natureevents Directory is the premier resource for scientists looking for the latest scientific conferences, courses, meetings and symposia. Featured across Nature Publishing Group journals and centrally at natureevents.com it is an essential reference guide to scientific events worldwide. | | | | | | | | | | | | | | | | | | | | | | | | | Your email address is in the Nature mailing list. You have been sent this Table of Contents Alert because you have opted in to receive it. You can change or discontinue your e-mail alerts at any time, by modifying your preferences on your nature.com account at: www.nature.com/nams/svc/myaccount (You will need to log in to be recognised as a nature.com registrant). For further technical assistance, please contact subscriptions@nature.com For other enquiries, please contact feedback@nature.com | | Nature Publishing Group | 75 Varick Street, 9th floor | New York | NY 10013-1917 | USA
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