The ISME Journal - Table of Contents alert Volume 7 Issue 1

TABLE OF CONTENTS Volume 7, Issue 1 (January 2013) In this issue Original Articles Short Communications Also new AOP Sign up for e-alerts Recommend to your library Web feed Subscribe Advertisement Check out ISMEJ’s most downloaded article in December 2012  454 Pyrosequencing reveals bacterial diversity of activated sludge from 14 sewage treatment plants Tong Zhang, Ming-Fei Shao and Lin Ye This study is the first application of PCR-based 454 pyrosequencing to characterize and compare multiple AS samples    Original Articles Top MICROBIAL POPULATION AND COMMUNITY ECOLOGY Link between microbial composition and carbon substrate-uptake preferences in a PHA-storing community Maria G E Albuquerque, Gilda Carvalho, Caroline Kragelund, Ana F Silva, Maria T Barreto Crespo, Maria A M Reis and Per H Nielsen ISME J 2013 7: 1-12; advance online publication, July 19, 2012; 10.1038/ismej.2012.74 Abstract | Full Text Unique nucleocytoplasmic dsDNA and +ssRNA viruses are associated with the dinoflagellate endosymbionts of corals Adrienne M S Correa, Rory M Welsh and Rebecca L Vega Thurber ISME J 2013 7: 13-27; advance online publication, July 12, 2012; 10.1038/ismej.2012.75 Abstract | Full Text Achieving temperature-size changes in a unicellular organism Open Jack Forster, Andrew G Hirst and Genoveva F Esteban ISME J 2013 7: 28-36; advance online publication, July 26, 2012; 10.1038/ismej.2012.76 Abstract | Full Text Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties Anja B Dohrmann, Meike Küting, Sebastian Jünemann, Sebastian Jaenicke, Andreas Schlüter and Christoph C Tebbe ISME J 2013 7: 37-49; advance online publication, July 12, 2012; 10.1038/ismej.2012.77 Abstract | Full Text Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat Open J Kirk Harris, J Gregory Caporaso, Jeffrey J Walker, John R Spear, Nicholas J Gold, Charles E Robertson, Philip Hugenholtz, Julia Goodrich, Daniel McDonald, Dan Knights, Paul Marshall, Henry Tufo, Rob Knight and Norman R Pace ISME J 2013 7: 50-60; advance online publication, July 26, 2012; 10.1038/ismej.2012.79 Abstract | Full Text Mechanisms determining the fate of dispersed bacterial communities in new environments Anna J Székely, Mercè Berga and Silke Langenheder ISME J 2013 7: 61-71; advance online publication, July 19, 2012; 10.1038/ismej.2012.80 Abstract | Full Text Dispersal of thermophilic Desulfotomaculum endospores into Baltic Sea sediments over thousands of years Júlia Rosa de Rezende, Kasper Urup Kjeldsen, Casey R J Hubert, Kai Finster, Alexander Loy and Bo Barker Jørgensen ISME J 2013 7: 72-84; advance online publication, July 26, 2012; 10.1038/ismej.2012.83 Abstract | Full Text MICROBE-MICROBE AND MICROBE-HOST INTERACTIONS Distinct cutaneous bacterial assemblages in a sampling of South American Amerindians and US residents Martin J Blaser, Maria G Dominguez-Bello, Monica Contreras, Magda Magris, Glida Hidalgo, Isidoro Estrada, Zhan Gao, Jose C Clemente, Elizabeth K Costello and Rob Knight ISME J 2013 7: 85-95; advance online publication, August 16, 2012; 10.1038/ismej.2012.81 Abstract | Full Text Inorganic carbon fixation by chemosynthetic ectosymbionts and nutritional transfers to the hydrothermal vent host-shrimp Rimicaris exoculata Julie Ponsard, Marie-Anne Cambon-Bonavita, Magali Zbinden, Gilles Lepoint, André Joassin, Laure Corbari, Bruce Shillito, Lucile Durand, Valérie Cueff-Gauchard and Philippe Compère ISME J 2013 7: 96-109; advance online publication, August 23, 2012; 10.1038/ismej.2012.87 Abstract | Full Text INTEGRATED GENOMICS AND POST-GENOMICS APPROACHES IN MICROBIAL ECOLOGY A biomolecular isolation framework for eco-systems biology Open Hugo Roume, Emilie EL Muller, Thekla Cordes, Jenny Renaut, Karsten Hiller and Paul Wilmes ISME J 2013 7: 110-121; advance online publication, July 5, 2012; 10.1038/ismej.2012.72 Abstract | Full Text Metaproteogenomic insights beyond bacterial response to naphthalene exposure and bio-stimulation Open María-Eugenia Guazzaroni, Florian-Alexander Herbst, Iván Lores, Javier Tamames, Ana Isabel Peláez, Nieves López-Cortés, María Alcaide, Mercedes V Del Pozo, José María Vieites, Martin von Bergen, José Luis R Gallego, Rafael Bargiela, Arantxa López-López, Dietmar H Pieper, Ramón Rosselló-Móra, Jesús Sánchez, Jana Seifert and Manuel Ferrer ISME J 2013 7: 122-136; advance online publication, July 26, 2012; 10.1038/ismej.2012.82 Abstract | Full Text Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton Open Sarahi L Garcia, Katherine D McMahon, Manuel Martinez-Garcia, Abhishek Srivastava, Alexander Sczyrba, Ramunas Stepanauskas, Hans-Peter Grossart, Tanja Woyke and Falk Warnecke ISME J 2013 7: 137-147; advance online publication, July 19, 2012; 10.1038/ismej.2012.86 Abstract | Full Text A small predatory core genome in the divergent marine Bacteriovorax marinus SJ and the terrestrial Bdellovibrio bacteriovorus Open Lisa C Crossman, Huan Chen, Ana-M Cerdeño-Tárraga, Karen Brooks, Michael A Quail, Silvia A Pineiro, Laura Hobley, R Elizabeth Sockett, Stephen D Bentley, Julian Parkhill, Henry N Williams and O Colin Stine ISME J 2013 7: 148-160; advance online publication, September 6, 2012; 10.1038/ismej.2012.90 Abstract | Full Text MICROBIAL ECOLOGY AND FUNCTIONAL DIVERSITY OF NATURAL HABITATS Microbial diversity within basement fluids of the sediment-buried Juan de Fuca Ridge flank Sean P Jungbluth, Jana Grote, Huei-Ting Lin, James P Cowen and Michael S Rappé ISME J 2013 7: 161-172; advance online publication, July 12, 2012; 10.1038/ismej.2012.73 Abstract | Full Text Measures of phylogenetic differentiation provide robust and complementary insights into microbial communities Donovan H Parks and Robert G Beiko ISME J 2013 7: 173-183; advance online publication, August 2, 2012; 10.1038/ismej.2012.88 Abstract | Full Text Ecology of uncultured Prochlorococcus clades revealed through single-cell genomics and biogeographic analysis Rex R Malmstrom, Sébastien Rodrigue, Katherine H Huang, Libusha Kelly, Suzanne E Kern, Anne Thompson, Sara Roggensack, Paul M Berube, Matthew R Henn and Sallie W Chisholm ISME J 2013 7: 184-198; advance online publication, August 16, 2012; 10.1038/ismej.2012.89 Abstract | Full Text Biogeography of Rhizobium radiobacter and distribution of associated temperate phages in deep subseafloor sediments Tim Engelhardt, Monika Sahlberg, Heribert Cypionka and Bert Engelen ISME J 2013 7: 199-209; advance online publication, August 2, 2012; 10.1038/ismej.2012.92 Abstract | Full Text Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient Barbara J Campbell and David L Kirchman ISME J 2013 7: 210-220; advance online publication, August 16, 2012; 10.1038/ismej.2012.93 Abstract | Full Text Short Communications Top MICROBE-MICROBE AND MICROBE-HOST INTERACTIONS The arthropod, but not the vertebrate host or its environment, dictates bacterial community composition of fleas and ticks Hadas Hawlena, Evelyn Rynkiewicz, Evelyn Toh, Andrew Alfred, Lance A Durden, Michael W Hastriter, David E Nelson, Ruichen Rong, Daniel Munro, Qunfeng Dong, Clay Fuqua and Keith Clay ISME J 2013 7: 221-223; advance online publication, June 28, 2012; 10.1038/ismej.2012.71 Abstract | Full Text Yersinia pestis infection and laboratory conditions alter flea-associated bacterial communities Ryan T Jones, Sara M Vetter, John Montenieiri, Jennifer Holmes, Scott A Bernhardt and Kenneth L Gage ISME J 2013 7: 224-228; advance online publication, August 16, 2012; 10.1038/ismej.2012.95 Abstract | Full Text Advertisement Follow ISME & ISMEJ on Facebook  for access to news, comments and articles make it a place to share information with others interested in the field    Natureevents is a fully searchable, multi-disciplinary database designed to maximise exposure for events organisers. 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