The ISME Journal - Table of Contents alert Volume 6 Issue 12

TABLE OF CONTENTS Volume 6, Issue 12 (December 2012) In this issue Original Articles Short Communication Corrigendum Also new AOP Sign up for e-alerts Recommend to your library Web feed Subscribe Advertisement Subscribe to The ISME Journal Gain access to the latest research within microbial ecology.Subscribe today   Original Articles Top MICROBIAL POPULATION AND COMMUNITY ECOLOGY Lake microbial communities are resilient after a whole-ecosystem disturbance Open Ashley Shade, Jordan S Read, Nicholas D Youngblut, Noah Fierer, Rob Knight, Timothy K Kratz, Noah R Lottig, Eric E Roden, Emily H Stanley, Jesse Stombaugh, Rachel J Whitaker, Chin H Wu and Katherine D McMahon ISME J 2012 6: 2153-2167; advance online publication, June 28, 2012; 10.1038/ismej.2012.56 Abstract | Full Text Shape and evolution of the fundamental niche in marine Vibrio Arne C Materna, Jonathan Friedman, Claudia Bauer, Christina David, Sara Chen, Ivy B Huang, April Gillens, Sean A Clarke, Martin F Polz and Eric J Alm ISME J 2012 6: 2168-2177; advance online publication, July 26, 2012; 10.1038/ismej.2012.65 Abstract | Full Text Roseobacter clade bacteria are abundant in coastal sediments and encode a novel combination of sulfur oxidation genes Sabine Lenk, Cristina Moraru, Sarah Hahnke, Julia Arnds, Michael Richter, Michael Kube, Richard Reinhardt, Thorsten Brinkhoff, Jens Harder, Rudolf Amann and Marc Mußmann ISME J 2012 6: 2178-2187; advance online publication, June 28, 2012; 10.1038/ismej.2012.66 Abstract | Full Text Bacterial diversity in relation to secondary production and succession on surfaces of the kelp Laminaria hyperborea Mia M Bengtsson, Kjersti Sjøtun, Anders Lanzén and Lise Øvreås ISME J 2012 6: 2188-2198; advance online publication, July 5, 2012; 10.1038/ismej.2012.67 Abstract | Full Text Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests Martin Hartmann, Charles G Howes, David VanInsberghe, Hang Yu, Dipankar Bachar, Richard Christen, Rolf Henrik Nilsson, Steven J Hallam and William W Mohn ISME J 2012 6: 2199-2218; advance online publication, August 2, 2012; 10.1038/ismej.2012.84 Abstract | Full Text MICROBE–MICROBE AND MICROBE–HOST INTERACTIONS Acyl-homoserine lactone-dependent eavesdropping promotes competition in a laboratory co-culture model Josephine R Chandler, Silja Heilmann, John E Mittler and E Peter Greenberg ISME J 2012 6: 2219-2228; advance online publication, July 5, 2012; 10.1038/ismej.2012.69 Abstract | Full Text INTEGRATED GENOMICS AND POST-GENOMICS APPROACHES IN MICROBIAL ECOLOGY Phaeobacter gallaeciensis genomes from globally opposite locations reveal high similarity of adaptation to surface life Sebastian Thole, Daniela Kalhoefer, Sonja Voget, Martine Berger, Tim Engelhardt, Heiko Liesegang, Antje Wollherr, Staffan Kjelleberg, Rolf Daniel, Meinhard Simon, Torsten Thomas and Thorsten Brinkhoff ISME J 2012 6: 2229-2244; advance online publication, June 21, 2012; 10.1038/ismej.2012.62 Abstract | Full Text MICROBIAL ENGINEERING Nitrification expanded: discovery, physiology and genomics of a nitrite-oxidizing bacterium from the phylum Chloroflexi Open Dimitry Y Sorokin, Sebastian Lücker, Dana Vejmelkova, Nadezhda A Kostrikina, Robbert Kleerebezem, W Irene C Rijpstra, Jaap S Sinninghe Damsté, Denis Le Paslier, Gerard Muyzer, Michael Wagner, Mark C M van Loosdrecht and Holger Daims ISME J 2012 6: 2245-2256; advance online publication, July 5, 2012; 10.1038/ismej.2012.70 Abstract | Full Text GEOMICROBIOLOGY AND MICROBIAL CONTRIBUTIONS TO GEOCHEMICAL CYCLES The metatranscriptome of a deep-sea hydrothermal plume is dominated by water column methanotrophs and lithotrophs Ryan A Lesniewski, Sunit Jain, Karthik Anantharaman, Patrick D Schloss and Gregory J Dick ISME J 2012 6: 2257-2268; advance online publication, June 14, 2012; 10.1038/ismej.2012.63 Abstract | Full Text Genome-enabled transcriptomics reveals archaeal populations that drive nitrification in a deep-sea hydrothermal plume Brett J Baker, Ryan A Lesniewski and Gregory J Dick ISME J 2012 6: 2269-2279; advance online publication, June 14, 2012; 10.1038/ismej.2012.64 Abstract | Full Text Metabolic stratification driven by surface and subsurface interactions in a terrestrial mud volcano Ting-Wen Cheng, Yung-Hsin Chang, Sen-Lin Tang, Ching-Hung Tseng, Pei-Wen Chiang, Kai-Ti Chang, Chih-Hsien Sun, Yue-Gau Chen, Hung-Chi Kuo, Chun-Ho Wang, Pao-Hsuan Chu, Sheng-Rong Song, Pei-Ling Wang and Li-Hung Lin ISME J 2012 6: 2280-2290; advance online publication, June 28, 2012; 10.1038/ismej.2012.61 Abstract | Full Text MICROBIAL ECOLOGY AND FUNCTIONAL DIVERSITY OF NATURAL HABITATS Protein-SIP enables time-resolved analysis of the carbon flux in a sulfate-reducing, benzene-degrading microbial consortium Martin Taubert, Carsten Vogt, Tesfaye Wubet, Sabine Kleinsteuber, Mika T Tarkka, Hauke Harms, François Buscot, Hans-Hermann Richnow, Martin von Bergen and Jana Seifert ISME J 2012 6: 2291-2301; advance online publication, July 12, 2012; 10.1038/ismej.2012.68 Abstract | Full Text MICROBIAL ECOSYSTEM IMPACTS Photophysiology and albedo-changing potential of the ice algal community on the surface of the Greenland ice sheet Marian L Yallop, Alexandre M Anesio, Rupert G Perkins, Joseph Cook, Jon Telling, Daniel Fagan, James MacFarlane, Marek Stibal, Gary Barker, Chris Bellas, Andy Hodson, Martyn Tranter, Jemma Wadham and Nicholas W Roberts ISME J 2012 6: 2302-2313; advance online publication, September 27, 2012; 10.1038/ismej.2012.107 Abstract | Full Text Short Communication Top MICROBE–MICROBE AND MICROBE–HOST INTERACTIONS Monitoring of Vibrio harveyi quorum sensing activity in real time during infection of brine shrimp larvae Tom Defoirdt and Patrick Sorgeloos ISME J 2012 6: 2314-2319; advance online publication, June 7, 2012; 10.1038/ismej.2012.58 Abstract | Full Text Corrigendum Top Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests Martin Hartmann, Charles G Howes, David VanInsberghe, Hang Yu, Dipankar Bachar, Richard Christen, Rolf Henrik Nilsson, Steven J Hallam and William W Mohn ISME J 2012 6: 2320; 10.1038/ismej.2012.100 Full Text Advertisement If you are unable to access the articles in this Table of Contents e-alert, your library may not subscribe to this journal. 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