Tuesday, May 15, 2012

Nature Communications - 15 May 2012

 
Nature Communications
 
 
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15 May 2012
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A study of leaf vein traits by Sack et al. reveals scaling relationships between globally distributed plant species.
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Nanotomy-based production of transferable and dispersible graphene nanostructures of controlled shape and size OPEN
Nihar Mohanty, David Moore, Zhiping Xu, T.S. Sreeprasad, Ashvin Nagaraja, Alfredo Alexander Rodriguez and Vikas Berry
Current top-down and bottom-up syntheses of graphene nanostructures suffer from low yields or do not produce structures with different and controlled shapes. Here, monodisperse graphene shapes are produced by diamond-edge cutting of pyrolytic graphite followed by exfoliation.
15 May | Nat Commun 3:844 doi:10.1038/ncomms1834 (2012)
Chemical sciences Materials science 
Nanotechnology
Abstract | Full Text | PDF (2,233 kB) |
Supplementary Information

Environmental noise exposure degrades normal listening processes
Xiaoming Zhou and Michael M. Merzenich
The damaging effects of loud noise on auditory function are well established, but the effects of low-level noise are not so well understood. Zhou and Merzenich chronically expose adult rats to structured low-level noise and find that it causes auditory cortex damage and sound discrimination impairment.
15 May | Nat Commun 3:843 doi:10.1038/ncomms1849 (2012)
Biological sciences Neuroscience 
Abstract | Full Text | PDF (952 kB) |
Supplementary Information

Serine-7 but not serine-5 phosphorylation primes RNA polymerase II CTD for P-TEFb recognition OPEN
Nadine Czudnochowski, Christian A. Bösken and Matthias Geyer
Phosphorylation of the carboxy-terminal domain of RNA polymerase II is important for controlling gene transcription. In this study, the transcription elongation factor Tefb is shown to phosphorylate serine-5 and its activity is enhanced when the polymerase is already phosphorylated on serine-7.
15 May | Nat Commun 3:842 doi:10.1038/ncomms1846 (2012)
Biological sciences Biochemistry 
Molecular biology 
Abstract | Full Text | PDF (1,188 kB) |
Supplementary Information

Activin induces cortical interneuron identity and differentiation in embryonic stem cell-derived telencephalic neural precursors OPEN
Serafí Cambray, Charles Arber, Graham Little, Antonios G. Dougalis, Vincenzo de Paola, Mark A. Ungless, Meng Li and Tristan A. Rodríguez
Signalling inputs to neural progenitors regulate the differentiation of the stem cell pool. By analysing the mechanisms occuring during neurogenesis, Cambray et al. report that activin is the pivotal factor regulating the differentiation of telencephalic neural precursors towards a cortical interneuron fate.
15 May | Nat Commun 3:841 doi:10.1038/ncomms1817 (2012)
Biological sciences Neuroscience 
Abstract | Full Text | PDF (1,734 kB) |
Supplementary Information

Symbiont fidelity and the origin of species in fungus-growing ants OPEN
Natasha J. Mehdiabadi, Ulrich G. Mueller, Seán G. Brady, Anna G. Himler and Ted R. Schultz
Fungus-growing ants cultivate fungi for food, but it is unclear whether single ant and fungal species are exclusive to one another. This study of C. wheeleri ants and their fungi shows that each ant species has been associated with a single fungal cultivar species for millions of years and that ant speciation coincides with shifts in fungal use.
15 May | Nat Commun 3:840 doi:10.1038/ncomms1844 (2012)
Biological sciences Ecology 
Evolution 
Abstract | Full Text | PDF (561 kB) |
Supplementary Information

Enamel-like apatite crown covering amorphous mineral in a crayfish mandible OPEN
Shmuel Bentov, Paul Zaslansky, Ali Al-Sawalmih, Admir Masic, Peter Fratzl, Amir Sagi, Amir Berman and Barbara Aichmayer
The compositional makeup of skeletons and teeth in invertebrates and vertebrates is generally different. This study examines the material composition and properties of freshwater crayfish mandibles and finds, in an unusual case of convergent evolution, that they are composed of an apatite layer that is similar to mammalian enamel.
15 May | Nat Commun 3:839 doi:10.1038/ncomms1839 (2012)
Biological sciences Biochemistry 
Biophysics Materials science 
Abstract | Full Text | PDF (1,120 kB) |
Supplementary Information

Phase fluctuations and the absence of topological defects in a photo-excited charge-ordered nickelate
W.S. Lee, Y.D. Chuang, R.G. Moore, Y. Zhu, L. Patthey, M. Trigo, D.H. Lu, P.S. Kirchmann, O. Krupin, M. Yi, M. Langner, N. Huse, J.S. Robinson, Y. Chen, S.Y. Zhou, G. Coslovich, B. Huber, D.A. Reis, R.A. Kaindl, R.W. Schoenlein, D. Doering, P. Denes, W.F. Schlotter, J.J. Turner, S.L. Johnson, M. Först, T. Sasagawa, Y.F. Kung, A.P. Sorini, A.F. Kemper, B. Moritz, T.P. Devereaux, D.-H. Lee, Z.X. Shen and Z. Hussain
Time- and momentum-resolved spectroscopy gives dynamical information on complex materials, enabling disentanglement of their coupled degrees of freedom. Using time-resolved X-ray diffraction at a free electron laser, Lee et al. investigate the charge order parameter in a striped nickelate.
15 May | Nat Commun 3:838 doi:10.1038/ncomms1837 (2012)
Physical sciences Condensed matter 
Materials science 
Abstract | Full Text | PDF (981 kB) |
Supplementary Information

Developmentally based scaling of leaf venation architecture explains global ecological patterns OPEN
Lawren Sack, Christine Scoffoni, Athena D. McKown, Kristen Frole, Michael Rawls, J. Christopher Havran, Huy Tran and Thusuong Tran
The size of dicotyledon leaves and their venation vary enormously across ecosystems. In this study, using 485 plant species, scaling relationships are presented between vein traits and leaf size, and explained based on a developmental algorithm that demonstrates why smaller leaves persist in drier areas.
15 May | Nat Commun 3:837 doi:10.1038/ncomms1835 (2012)
Biological sciences Ecology 
Evolution 
Plant sciences
Abstract | Full Text | PDF (847 kB) |
Supplementary Information

A crucial role for bone morphogenetic protein-Smad1 signalling in the DNA damage response
Jenny Fung Ling Chau, Deyong Jia, Zhongfeng Wang, Zhi Liu, Yuanyu Hu, Xin Zhang, Hao Jia, Keng Po Lai, Wai Fook Leong, Bi Jin Au, Yuji Mishina, Ye-Guang Chen, Christine Biondi, Elizabeth Robertson, Dong Xie, Huijuan Liu, Lin He, Xueying Wang, Qiang Yu and Baojie Li
The bone morphogenetic protein (BMP) and Smad1 signalling pathway is required for embryogenesis. In this study, Smad1 is shown to be phosphorylated by Atm in response to DNA damage and this results in elevated Smad1 signalling, thus uncovering a new role for this pathway in the DNA damage response.
15 May | Nat Commun 3:836 doi:10.1038/ncomms1832 (2012)
Biological sciences Cancer 
Cell biology Molecular biology
Abstract | Full Text | PDF (1,743 kB) |
Supplementary Information

Contrasting arbuscular mycorrhizal responses of vascular and non-vascular plants to a simulated Palaeozoic CO2 decline OPEN
Katie J. Field, Duncan D. Cameron, Jonathan R. Leake, Stefanie Tille, Martin I. Bidartondo and David J. Beerling
Vascular plants with root systems evolved in the mid-Palaeozoic with symbiotic fungi. Field et al. show that in contrast to non-vascular plants lacking roots, the efficiency of plant–fungal symbiosis increased for vascular plants with root systems as carbon dioxide levels declined in the mid-Palaeozoic.
15 May | Nat Commun 3:835 doi:10.1038/ncomms1831 (2012)
Biological sciences Ecology 
Evolution Plant sciences 
Abstract | Full Text | PDF (761 kB)

Abyssal undular vortices in the Eastern Mediterranean basin
A. Rubino, F. Falcini, D. Zanchettin, V. Bouche, E. Salusti, M. Bensi, G. Riccobene, G. De Bonis, R. Masullo, F. Simeone, P. Piattelli, P. Sapienza, S. Russo, G. Platania, M. Sedita, P. Reina, R. Avolio, N. Randazzo, D. Hainbucher and A. Capone
Small-scale ocean dynamics can have wide reaching impacts on the larger-scale ocean circulation. Using temperature and velocity data, this study shows the presence of abyssal vortices in the Eastern Mediterranean basin, adding complexity to the structure and evolution of water masses in this region.
15 May | Nat Commun 3:834 doi:10.1038/ncomms1836 (2012)
Earth sciences Climate science 
Oceanography
Abstract | Full Text | PDF (1,631 kB)

Giant nonlinear optical activity in a plasmonic metamaterial
Mengxin Ren, Eric Plum, Jingjun Xu and Nikolay I. Zheludev
Light propagating in a medium can undergo polarization rotation, an effect that depends on light intensity and chiral properties. Ren et al. report polarization rotation in a plasmonic metamaterial with million-fold stronger nonlinearity than that found in natural crystals.
15 May | Nat Commun 3:833 doi:10.1038/ncomms1805 (2012)
Physical sciences Optical physics 
Abstract | Full Text | PDF (817 kB)

The origin of pelletal lapilli in explosive kimberlite eruptions
T.M. Gernon, R.J. Brown, M.A. Tait and T.K. Hincks
Kimberlites are volatile-rich magmas that form diverging pipes containing pelletal lapilli - well rounded clasts that consist of an inner seed particle. Gernon et al. suggest that pelletal lapilli are formed when fluid volatile-rich melts intrude into earlier volcaniclastic infill close to the diatreme root zone.
15 May | Nat Commun 3:832 doi:10.1038/ncomms1842 (2012)
Earth sciences Geology and geophysics 
Abstract | Full Text | PDF (1,586 kB)

Switching of macroscopic molecular recognition selectivity using a mixed solvent system OPEN
Yongtai Zheng, Akihito Hashidzume, Yoshinori Takashima, Hiroyasu Yamaguchi and Akira Harada
Self-assembly via molecular recognition events is used in the production of functionalized materials. This Article reports that the macroscopic assembly of polyacrylamide gels can be controlled by changing the composition of a mixed solvent system.
15 May | Nat Commun 3:831 doi:10.1038/ncomms1841 (2012)
Chemical sciences Materials science 
Abstract | Full Text | PDF (444 kB) |
Supplementary Information

Resonant magnetic exciton mode in the heavy-fermion antiferromagnet CeB6  OPEN
G. Friemel, Yuan Li, A.V. Dukhnenko, N.Y. Shitsevalova, N.E. Sluchanko, A. Ivanov, V.B. Filipov, B. Keimer and D.S. Inosov
Resonant magnetic excitations are common in unconventional superconductors, but the mechanism for their formation is elusive. Using inelastic neutron scattering, this study finds similar excitations in the non-superconducting heavy-fermion metal CeB6, suggesting common behaviour between the two ground states.
15 May | Nat Commun 3:830 doi:10.1038/ncomms1821 (2012)
Physical sciences Condensed matter 
Materials science 
Abstract | Full Text | PDF (2,432 kB)
 
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