Wednesday, December 14, 2011

The EMBO Journal - Table of Contents alert Volume 30 Issue 24

The EMBO Journal

TABLE OF CONTENTS

14 December 2011 | Volume 30, Issue 24

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Human pluripotent stem cells decouple respiration from energy production

In human pluripotent stem cells, uncoupling protein 2 switches energy metabolism from respiration to glycolysis preventing their premature differentiation.

Ng Shyh-Chang, Yuxiang Zheng, Jason W Locasale and Lewis C Cantley

The EMBO Journal (2011), 30, 4851 - 4852; 10.1038/emboj.2011.436

Abstract | Full text | PDF

Published online: 14 December 2011

Building a double hexamer of DNA helicase at eukaryotic replication origins

Yeast Cdt1 multitasks in recruitment, loading and activation of the Mcm2-7 helicase at replication origins—including a key role in bringing two helicases to a single origin recognition complex

Karim Labib

The EMBO Journal (2011), 30, 4853 - 4855; 10.1038/emboj.2011.437

Abstract | Full text | PDF

Published online: 14 December 2011

Rotate into shape: MreB and bacterial morphogenesis

Several recent papers uncover interactions between the bacterial actin homologue, MreB, and components of the cell-wall synthesis machinery, revealing a tight interplay between cytoskeletal dynamics and cell-wall deposition.

Sven van Teeffelen and Zemer Gitai

The EMBO Journal (2011), 30, 4856 - 4857; 10.1038/emboj.2011.430

Abstract | Full text | PDF

Published online: 14 December 2011

The unmasking of novel unipotent stem cells in the mammary gland

Employing genetic lineage-tracing studies reveal the existence of novel, unipotent stem cells that serve the normal homeostasis of postnatal mammary epithelium. These findings add surprising complexity to the established stem cell hierarchy in the mammary epithelium.

Jane E Visvader and Geoffrey J Lindeman

The EMBO Journal (2011), 30, 4858 - 4859; 10.1038/emboj.2011.415

Abstract | Full text | PDF

Published online: 08 November 2011

Articles

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UCP2 regulates energy metabolism and differentiation potential of human pluripotent stem cells

While studying metabolic fluxes in human pluripotent stem cells, this paper reveals UCP2 as metabolic switch from glycolysis to OXPHOS, facilitating early differentiation events.

Jin Zhang, Ivan Khvorostov, Jason S Hong, Yavuz Oktay, Laurent Vergnes, Esther Nuebel, Paulin N Wahjudi, Kiyoko Setoguchi, Geng Wang, Anna Do, Hea-Jin Jung, J Michael McCaffery, Irwin J Kurland, Karen Reue, Wai-Nang P Lee, Carla M Koehler and Michael A Teitell

The EMBO Journal (2011), 30, 4860 - 4873; 10.1038/emboj.2011.401

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 15 November 2011

FGF signalling inhibits neural induction in human embryonic stem cells

The role of FGF-signal inhibition in embryonic cell fate decisions remained controversial. This paper identifies OTX2 induction and downregulation of Oct4/Nanog as immediate downstream events that cooperate with Pax6 for efficient establishment of the neuroectodermal lineage.

Boris Greber, Philippe Coulon, Miao Zhang, Sören Moritz, Stefan Frank, Arnoldo José Müller-Molina, Marcos J Araúzo-Bravo, Dong Wook Han, Hans-Christian Pape and Hans R Schöler

The EMBO Journal (2011), 30, 4874 - 4884; 10.1038/emboj.2011.407

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 15 November 2011

Multiple Cdt1 molecules act at each origin to load replication-competent Mcm2–7 helicases

Replication initiation requires back-to-back loading of two Mcm2–7 helicases at a single origin. The replication licensing factor Cdt1 contributes to several discrete steps in this process, namely origin recruitment, chromatin loading, and conformational activation of Mcm2–7.

Thomas J Takara and Stephen P Bell

The EMBO Journal (2011), 30, 4885 - 4896; 10.1038/emboj.2011.394

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 01 November 2011

Dpb11 coordinates Mec1 kinase activation with cell cycle-regulated Rad9 recruitment

Cyclin-dependent kinase phosphorylation of the replication checkpoint mediator Rad9 controls its association with Dpb11, a key activator of the yeast ATR homologue Mec1, thus conferring cell-cycle dependence to checkpoint signalling.

Boris Pfander and John F X Diffley

The EMBO Journal (2011), 30, 4897 - 4907; 10.1038/emboj.2011.345

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 23 September 2011

Inhibition of autophagy by TAB2 and TAB3

Expanding on recent crosstalk between autophagy and the NF-κB pathway, TAB2 and TAB3 are characterized as novel modulators of Beclin 1. Autophagic stimulation releases constitutive inhibition of Beclin 1 by TAB2/3 to initiate efficient autophagosome biogenesis.

Alfredo Criollo, Mireia Niso-Santano, Shoaib Ahmad Malik, Mickael Michaud, Eugenia Morselli, Guillermo Mariño, Sylvie Lachkar, Alexander V Arkhipenko, Francis Harper, Gérard Pierron, Jean-Christophe Rain, Jun Ninomiya-Tsuji, José M Fuentes, Sergio Lavandero, Lorenzo Galluzzi, Maria Chiara Maiuri and Guido Kroemer

The EMBO Journal (2011), 30, 4908 - 4920; 10.1038/emboj.2011.413

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 11 November 2011

Regulation of p53 stability and function by the deubiquitinating enzyme USP42

An RNAi screen identifies USP42 as a ubiquitin-specific isopeptidase that stabilizes p53 under transient stress conditions, and selectively enhances p53 function in the induction of cell-cycle arrest.

Andreas K Hock, Arnaud M Vigneron, Stephanie Carter, Robert L Ludwig and Karen H Vousden

The EMBO Journal (2011), 30, 4921 - 4930; 10.1038/emboj.2011.419

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 15 November 2011

A widespread family of bacterial cell wall assembly proteins

While most steps of the bacterial cell wall synthesis pathway are well characterized, the identity of the enzymes that attach anionic polymers to peptidoglycan has been elusive. The LCP proteins are here shown to be likely candidates for this missing link.

Yoshikazu Kawai, Jon Marles-Wright, Robert M Cleverley, Robyn Emmins, Shu Ishikawa, Masayoshi Kuwano, Nadja Heinz, Nhat Khai Bui, Christopher N Hoyland, Naotake Ogasawara, Richard J Lewis, Waldemar Vollmer, Richard A Daniel and Jeff Errington

The EMBO Journal (2011), 30, 4931 - 4941; 10.1038/emboj.2011.358

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 30 September 2011

Directionality of individual kinesin-5 Cin8 motors is modulated by loop 8, ionic strength and microtubule geometry

The yeast kinesin-5 Cin8 can move bi-directionally on mitotic spindles and in-vitro assays provide insights into the molecular basis underlying this directional switching.

Adina Gerson-Gurwitz, Christina Thiede, Natalia Movshovich, Vladimir Fridman, Maria Podolskaya, Tsafi Danieli, Stefan Lakämper, Dieter R Klopfenstein, Christoph F Schmidt and Larisa Gheber

The EMBO Journal (2011), 30, 4942 - 4954; 10.1038/emboj.2011.403

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 18 November 2011

Proper synaptic vesicle formation and neuronal network activity critically rely on syndapin I

F-BAR domain proteins sense or induce membrane curvature and play a widespread role in intracellular trafficking events. This study characterizes syndapin I knockout mice at the neurological, cell biological and molecular levels and demonstrates that this F-BAR protein acts as membrane anchoring factor for dynamins during synaptic vesicle regeneration.

Dennis Koch, Isabella Spiwoks-Becker, Victor Sabanov, Anne Sinning, Tamar Dugladze, Anne Stellmacher, Rashmi Ahuja, Julia Grimm, Susann Schüler, Anke Müller, Frank Angenstein, Tariq Ahmed, Alexander Diesler, Markus Moser, Susanne tom Dieck, Rainer Spessert, Tobias Maria Boeckers, Reinhard Fässler, Christian Andreas Hübner, Detlef Balschun, Tengis Gloveli, Michael Manfred Kessels and Britta Qualmann

The EMBO Journal (2011), 30, 4955 - 4969; 10.1038/emboj.2011.339

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 16 September 2011

OCRL controls trafficking through early endosomes via PtdIns4,5P2-dependent regulation of endosomal actin

Mutations in the PtdIns4,5P2 5-phosphatase OCRL cause the oculo-cerebro-renal Lowe syndrome. The molecular mechanisms underlying this condition involve defective early endosomal recycling of megalin, the receptor mediating protein reabsorption in the kidney.

Mariella Vicinanza, Antonella Di Campli, Elena Polishchuk, Michele Santoro, Giuseppe Di Tullio, Anna Godi, Elena Levtchenko, Maria Giovanna De Leo, Roman Polishchuk, Lisette Sandoval, Maria-Paz Marzolo and Maria Antonietta De Matteis

The EMBO Journal (2011), 30, 4970 - 4985; 10.1038/emboj.2011.354

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 04 October 2011

Guanylate kinase domains of the MAGUK family scaffold proteins as specific phospho-protein-binding modules

Membrane-associated guanylate kinases (MAGUK) family proteins contain an inactive guanylate kinase (GK) domain, whose function has been elusive. Here, this domain is revealed as a new type of phospho-peptide-binding module, in which the GMP-binding site has evolved to accommodate phospho-serines or -threonines.

Jinwei Zhu, Yuan Shang, Caihao Xia, Wenning Wang, Wenyu Wen and Mingjie Zhang

The EMBO Journal (2011), 30, 4986 - 4997; 10.1038/emboj.2011.428

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 25 November 2011

PABP is not essential for microRNA-mediated translational repression and deadenylation in vitro

The mechanism by which miRNAs induce silencing of gene expression remains a matter of much debate. This study shows that maximal silencing is dependent on multiple concerted interactions in the context of the full-length GW182 protein rather than single protein–protein associations.

Takashi Fukaya and Yukihide Tomari

The EMBO Journal (2011), 30, 4998 - 5009; 10.1038/emboj.2011.426

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 25 November 2011

Structure of the Shq1–Cbf5–Nop10–Gar1 complex and implications for H/ACA RNP biogenesis and dyskeratosis congenita

Shq1 is required for the biogenesis of eukaryotic H/ACA ribonucleoproteins (RNPs) involved in telomere maintenance and pseudo-uridylation of rRNA and snRNA. This study describes the crystal structure of Shq1 in complex with three H/ACA RNP proteins, suggesting that Shq1 acts as an assembly chaperone of immature RNPs.

Shuang Li, Jingqi Duan, Dandan Li, Shoucai Ma and Keqiong Ye

The EMBO Journal (2011), 30, 5010 - 5020; 10.1038/emboj.2011.427

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 25 November 2011

Editor's Note

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miR-605 joins p53 network to form a p53:miR-605:Mdm2 positive feedback loop in response to stress

Jiening Xiao, Huixian Lin, Xiaobin Luo, Xiaoyan Luo and Zhiguo Wang

The EMBO Journal (2011), 30, 5021; 10.1038/emboj.2011.463

Abstract | Full text | PDF

Published online: 14 December 2011

Corrigendum

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Extracellular heat shock protein-90α: linking hypoxia to skin cell motility and wound healing

Wei Li, Yong Li, Shengxi Guan, Jianhua Fan, Chieh-Fang Cheng, Alexandra M Bright, Cindi Chinn, Mei Chen and David T Woodley

The EMBO Journal (2011), 30, 5022; 10.1038/emboj.2011.420

Abstract | Full text | PDF

Published online: 14 December 2011

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