Thursday, January 16, 2020

Table of Contents Alert: The EMBO Journal, Vol. 39, No. 2, 15 January 2020

The Non-coding Genome
Cover Image The EMBO Journal
Volume 39, Issue 2

15 January 2020


News & Views

Shugoshin 2—a new guardian for heat shock transcription
Amoldeep S Kainth, Rajyalakshmi Meduri, Vickky Pandit, Linda S Rubio, David S Gross

EMBO J (2020) 39: e104077 | First Published: 30 December 2019

New work finds heat response master regulator HSF1 co‐opting a pericentromeric protein for transcriptional activation and rescue of cells from proteotoxic stress.

Plant phosphate status drives host microbial preferences: a trade‐off between fungi and bacteria
Alga Zuccaro

EMBO J (2020) 39: e104144 | First Published: 30 December 2019

A new study shows that phosphate availability to the host plant drives microbial colonization versus immunity activation switch in response to bacterial volatile compounds.

Review

Beyond inflammasomes: emerging function of gasdermins during apoptosis and NETosis
Kaiwen W Chen, Benjamin Demarco, Petr Broz

EMBO J (2020) 39: e103397 | First Published: 03 December 2019

Broz and colleagues review the central role and regulation of the pore‐forming Gasdermin D protein in facilitating cell death as common effector of several distinct pathways.

Articles

Open Access
ESCRT machinery mediates selective microautophagy of endoplasmic reticulum in yeast
Jasmin A Schäfer, Julia P Schessner, Peter W Bircham, Takuma Tsuji, Charlotta Funaya, Oliver Pajonk, Katharina Schaeff, Giulia Ruffini, Dimitrios Papagiannidis, Michael Knop, Toyoshi Fujimoto, Sebastian Schuck

EMBO J (2020) 39: e102586 | First Published: 05 December 2019

Micro‐ER‐phagy requires the Nem1‐Spo7 phosphatase complex and ESCRT proteins for membrane scission during uptake of multilamellar ER whorls into the lysosome.

Open Access
Rhizobacterium‐derived diacetyl modulates plant immunity in a phosphate‐dependent manner
Rafael JL Morcillo, Sunil K Singh, Danxia He, Guo An, Juan I Vílchez, Kai Tang, Fengtong Yuan, Yazhou Sun, Chuyang Shao, Song Zhang, Yu Yang, Xiaomin Liu, Yashan Dang, Wei Wang, Jinghui Gao, Weichang Huang, Mingguang Lei, Chun‐Peng Song, Jian‐Kang Zhu, Alberto P Macho, Pual W Paré, Huiming Zhang

EMBO J (2020) 39: e102602 | First Published: 05 December 2019

A volatile compound produced by a plant growth‐promoting rhizobacterium differentially affects plant immunity and plant response to symbiont colonization depending on phosphate availability.

Open Access
PTPN2 phosphatase deletion in T cells promotes anti‐tumour immunity and CAR T‐cell efficacy in solid tumours
Florian Wiede, Kun‐Hui Lu, Xin Du, Shuwei Liang, Katharina Hochheiser, Garron T Dodd, Pei K Goh, Conor Kearney, Deborah Meyran, Paul A Beavis, Melissa A Henderson, Simone L Park, Jason Waithman, Sheng Zhang, Zhong‐Yin Zhang, Jane Oliaro, Thomas Gebhardt, Phillip K Darcy, Tony Tiganis

EMBO J (2020) 39: e103637 | First Published: 05 December 2019

Protein tyrosine phosphatase N2 inhibits tumour T‐cell infiltration and CAR T‐cell cytotoxicity and may thus be a therapeutic target to enhance solid‐tumour immunotherapy.

PLK4 deubiquitination by Spata2‐CYLD suppresses NEK7‐mediated NLRP3 inflammasome activation at the centrosome
Xiao‐Dong Yang, Wenguo Li, Shuangyan Zhang, Dandan Wu, Xiaoli Jiang, Rong Tan, Xiaoyin Niu, Qijun Wang, Xuefeng Wu, Zhiduo Liu, Lin‐Feng Chen, Jun Qin, Bing Su

EMBO J (2020) 39: e102201 | First Published: 25 November 2019

The centrosomal protein Spata2 is as a novel regulator of NEK7 phosphorylation and NLRP3‐mediated inflammatory responses.

Polo regulates Spindly to prevent premature stabilization of kinetochore–microtubule attachments
João Barbosa, Torcato Martins, Tanja Bange, Li Tao, Carlos Conde, Claudio Sunkel

EMBO J (2020) 39: e100789 | First Published: 18 December 2019

RNAi screening identifies the RZZ complex as mediator of early mitotic spindle attachment destabilization via high Polo kinase activity in Drosophila.

Human chromosome‐specific aneuploidy is influenced by DNA‐dependent centromeric features
Marie Dumont, Riccardo Gamba, Pierre Gestraud, Sjoerd Klaasen, Joseph T Worrall, Sippe G De Vries, Vincent Boudreau, Catalina Salinas‐Luypaert, Paul S Maddox, Susanne MA Lens, Geert JPL Kops, Sarah E McClelland, Karen H Miga, Daniele Fachinetti

EMBO J (2020) 39: e102924 | First Published: 21 November 2019

Missegregation rates vary among different chromosomes, with biased based on abundance of DNA‐dependent centromeric components rather than centromere length.

NuMA assemblies organize microtubule asters to establish spindle bipolarity in acentrosomal human cells
Takumi Chinen, Shohei Yamamoto, Yutaka Takeda, Koki Watanabe, Kanako Kuroki, Kaho Hashimoto, Daisuke Takao, Daiju Kitagawa

EMBO J (2020) 39: e102378 | First Published: 29 November 2019

Studies on acentrosomal human cells suggest that canonical centrosomal and NuMA/dynein‐mediated mechanisms may redundantly promote establishment of bipolar mitotic spindles after nuclear envelope breakdown.

UV‐B photoreceptor UVR8 interacts with MYB73/MYB77 to regulate auxin responses and lateral root development
Yu Yang, Libo Zhang, Ping Chen, Tong Liang, Xuan Li, Hongtao Liu

EMBO J (2020) 39: e101928 | First Published: 28 November 2019

The UV‐B light inhibits auxin‐induced root and shoot growth via direct interaction between the photoreceptor UVR8 and auxin‐responsive transcription factors MYB73/MYB77.

Open Access
LRRK2 regulates endoplasmic reticulum–mitochondrial tethering through the PERK‐mediated ubiquitination pathway
Toshihiko Toyofuku, Yuki Okamoto, Takako Ishikawa, Shigemi Sasawatari, Atsushi Kumanogoh

EMBO J (2020) 39: e100875 | First Published: 10 December 2019

LRKK2 mutation counteracts PERK‐mediated activation of E3 ubiquitin ligases and controls mitochondria‐associated ER membrane formation.

Zfp281 orchestrates interconversion of pluripotent states by engaging Ehmt1 and Zic2
Daniela Mayer, Michael B Stadler, Melanie Rittirsch, Daniel Hess, Ilya Lukonin, Maria Winzi, Austin Smith, Frank Buchholz, Joerg Betschinger

EMBO J (2020) 39: e102591 | First Published: 29 November 2019

Cell type‐invariant chromatin association of zinc finger transcription factor Zfp281 facilitates bidirectional regulation of mouse naïve pluripotency.

The GTPase Rab39a promotes phagosome maturation into MHC‐I antigen‐presenting compartments
Freidrich M Cruz, Jeff D Colbert, Kenneth L Rock

EMBO J (2020) 39: e102020 | First Published: 10 December 2019

Rab39a enhances antigen cross‐presentation by dendritic cells by stabilizing phagosomal antigens and peptide‐empty MHC‐I molecules, and by promoting peptide loading onto the latter.

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