Scientific Reports Biological e-alert: 30 October 2018

30 October 2018       •Visit Scientific Reports •Submit your manuscript to Scientific Reports     Welcome to your Table of Contents e-alert for Scientific Reports           Biological Sciences               Neural dynamics of verbal working memory in auditory description naming ▶     Toshimune Kambara, Erik C. Brown, Brian H. Silverstein et al.             Using patient-derived iPSCs to develop humanized mouse models for chronic myelomonocytic leukemia and therapeutic drug identification, including liposomal clodronate ▶     Kazuki Taoka, Shunya Arai, Keisuke Kataoka et al.             Calcite moonmilk of microbial origin in the Etruscan Tomba degli Scudi in Tarquinia, Italy ▶     Angela Cirigliano, Maria Cristina Tomassetti, Marta Di Pietro et al.             Pathogen Identification Direct From Polymicrobial Specimens Using Membrane Glycolipids ▶     William E. Fondrie, Tao Liang, Benjamin L. Oyler et al.             Effects of circadian misalignment on sleep in mice ▶     Sibah Hasan, Russell G. Foster, Vladyslav V. Vyazovskiy et al.             Thermal pace-of-life strategies improve phenological predictions in ectotherms ▶     Quentin Struelens, François Rebaudo, Reinaldo Quispe et al.             Microbial structure and function in infant and juvenile rhesus macaques are primarily affected by age, not vaccination status ▶     Yu Hasegawa, Britni Curtis, Vernon Yutuc et al.             Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains ▶     Susmita Shrivastava, Vinita Puri, Kari A. Dilley et al.             Behavioral evidence for the use of functional categories during group reversal task performance in monkeys ▶     Takayuki Hosokawa, Yasutaka Honda, Munekazu Yamada et al.             Allostatic load and disordered white matter microstructure in overweight adults ▶     J. Ottino-González, M. A. Jurado, I. García-García et al.             Non-reassuring foetal status and neonatal irritability in the Japan Environment and Children’s Study: A cohort study ▶     Seiichi Morokuma, Takehiro Michikawa, Kiyoko Kato et al.             Large scale structure-function mappings of the human subcortex ▶     Max C. Keuken, Leendert van Maanen, Michiel Boswijk et al.             Pulmonary Isolation of Multidrug resistant “Mycobacterium simulans” and Mycobacterium tuberculosis from a patient in the Horn of Africa ▶     Fériel Bouzid, Djaltou Aboubaker Osman, Emeline Baptiste et al.             Missing elimination via membrane vesicle shedding contributes to the diminished calcium sensitivity of listeriolysin O ▶     Jana Maurer, Sabrina Hupp, Helena Pillich et al.             Rhythmic fluctuations of saccadic reaction time arising from visual competition ▶     Samson Chota, Canhuang Luo, Sébastien M. Crouzet et al.             Single-Stranded Nucleic Acids Regulate TLR3/4/7 Activation through Interference with Clathrin-Mediated Endocytosis ▶     Peter Järver, Aleksandra Dondalska, Candice Poux et al.             Investigating the Ca2+-dependent and Ca2+-independent mechanisms for mammalian cone light adaptation ▶     Frans Vinberg, Vladimir J. Kefalov             DNA repair protein Rad18 restricts LINE-1 mobility ▶     Yasuo Ariumi, Koudai Kawano, Mariko Yasuda-Inoue et al.             Integrative taxonomy resolves taxonomic uncertainty for freshwater mussels being considered for protection under the U.S. Endangered Species Act ▶     Nathan A. Johnson, Chase H. Smith, John M. Pfeiffer et al.             Behavioral flexibility promotes collective consistency in a social insect ▶     Linda Karen Garrison, Christoph Johannes Kleineidam, Anja Weidenmüller             Uric acid enhances alteplase-mediated thrombolysis as an antioxidant ▶     Kiyoshi Kikuchi, Kentaro Setoyama, Eiichiro Tanaka et al.             Transcriptomic and functional network features of lung squamous cell carcinoma through integrative analysis of GEO and TCGA data ▶     Yin Li, Jie Gu, Fengkai Xu et al.             Antiviral activity of the mineralocorticoid receptor NR3C2 against Herpes simplex virus Type 1 (HSV-1) infection ▶     Jürgen G. Haas, Julia Weber, Orland Gonzalez et al.             Plasma lipidomic analysis reveals strong similarities between lipid fingerprints in human, hamster and mouse compared to other animal species ▶     Zied Kaabia, Julie Poirier, Michelle Moughaizel et al.             Selection, hybridization, and the evolution of morphology in the Lake Malaŵi endemic cichlids of the genus Labeotropheus ▶     Michael J. Pauers, Kelsey R. Fox, Robert A. Hall et al.             The mitochondrial antioxidant SS-31 increases SIRT1 levels and ameliorates inflammation, oxidative stress and leukocyte-endothelium interactions in type 2 diabetes ▶     Irene Escribano-Lopez, Noelia Diaz-Morales, Francesca Iannantuoni et al.             GBS-derived SNP catalogue unveiled wide genetic variability and geographical relationships of Italian olive cultivars ▶     Nunzio D’Agostino, Francesca Taranto, Salvatore Camposeo et al.             Integrated evidence reveals a new species in the ancient blue coral genus Heliopora (Octocorallia) ▶     Zoe T. Richards, Nina Yasuda, Taisei Kikuchi et al.             ASXL1 and SETBP1 mutations promote leukaemogenesis by repressing TGFβ pathway genes through histone deacetylation ▶     Makoto Saika, Daichi Inoue, Reina Nagase et al.             Solid-phase enzyme catalysis of DNA end repair and 3′ A-tailing reduces GC-bias in next-generation sequencing of human genomic DNA ▶     Aihua Zhang, Shaohua Li, Lynne Apone et al.             Environmental filtering and community delineation in the streambed ecotone ▶     Ignacio Peralta-Maraver, Jason Galloway, Malte Posselt et al.             Protein-Engineered Large Area Adipose-derived Stem Cell Sheets for Wound Healing ▶     Jongbeom Na, Seung Yong Song, Jae Dong Kim et al.             Liberation of recalcitrant cell wall sugars from oak barrels into bourbon whiskey during aging ▶     Jarrad Gollihue, Mitchell Richmond, Harlen Wheatley et al.             NADPH oxidase NOX4 is a glycolytic regulator through mROS-HIF1α axis in thyroid carcinomas ▶     Ping Tang, Hao Dang, Jie Huang et al.             Genome-wide RNA-seq analysis indicates that the DAG1 transcription factor promotes hypocotyl elongation acting on ABA, ethylene and auxin signaling ▶     Riccardo Lorrai, Francesco Gandolfi, Alessandra Boccaccini et al.             Endothelial cells release cardioprotective exosomes that may contribute to ischaemic preconditioning ▶     Sean M. Davidson, Jaime A. Riquelme, Ying Zheng et al.             Intravital Two-photon Imaging of Ca2+ signaling in Secretory Organs of Yellow Cameleon Transgenic Mice ▶     Kai Jin, Toshihiro Imada, Shigeru Nakamura et al.             Comparison of efficacy and toxicity of bevacizumab, endostar and apatinib in transgenic and human lung cancer xenograftzebrafish model ▶     Yinghua Jin, Lingxiao Wei, Qiuying Jiang et al.             Identification and Characterization of USP7 Targets in Cancer Cells ▶     Anna Georges, Edyta Marcon, Jack Greenblatt et al.             Mapping anaerobic sludge bed community adaptations to manure supernatant in biogas reactors ▶     Anna Synnøve Røstad Nordgård, Wenche Hennie Bergland, Rune Bakke et al.             Transcriptome Dynamics During Turbot Spermatogenesis Predicting the Potential Key Genes Regulating Male Germ Cell Proliferation and Maturation ▶     Xueying Wang, Qinghua Liu, Shihong Xu et al.             The non-linear electrical properties of human skin make it a generic memristor ▶     Oliver Pabst, Ørjan G. Martinsen, Leon Chua             Multiplexed Autoantibody Signature for Serological Detection of Canine Mammary Tumours ▶     Shahid Hussain, Sonal Saxena, Sameer Shrivastava et al.             Lower protein expression levels of MHC class I chain-related gene A in hepatocellular carcinoma are at high risk of recurrence after surgical resection ▶     Chung-Feng Huang, Shu-Chi Wang, Wen-Tsan Chang et al.             Neighbors help neighbors control urban mosquitoes ▶     Brian J. Johnson, David Brosch, Arlene Christiansen et al.             Deciphering the bacterial composition in the rhizosphere of Baphicacanthus cusia (NeeS) Bremek ▶     Meijuan Zeng, Yongjia Zhong, Shijie Cai et al.             High expression of WNT7A predicts poor prognosis and promote tumor metastasis in pancreatic ductal adenocarcinoma ▶     Dong-jin Wu, Yong-sheng Jiang, Rui-zhe He et al.             Binocular disparity can augment the capacity of vision without affecting subjective experience of depth ▶     Henry Railo, Joni Saastamoinen, Sipi Kylmälä et al.             Whole genome sequencing for investigations of meningococcal outbreaks in the United States: a retrospective analysis ▶     Melissa J. Whaley, Sandeep J. Joseph, Adam C. Retchless et al.             The mesophilic archaeon Methanosarcina acetivorans counteracts uracil in DNA with multiple enzymes: EndoQ, ExoIII, and UDG ▶     Miyako Shiraishi, Sonoko Ishino, Matthew Heffernan et al.             Beneficial effects of intravenous iron therapy in a rat model of heart failure with preserved systemic iron status but depleted intracellular cardiac stores ▶     Aleksandra Paterek, Marta Kępska, Barbara Sochanowicz et al.             Women with prolonged nausea in pregnancy have increased risk for depressive symptoms postpartum ▶     Stavros I. Iliadis, Cathrine Axfors, Sara Johansson et al.             Characterization of transgenic rice expressing fusion protein Cry1Ab/Vip3A for insect resistance ▶     Chao Xu, Jiahui Cheng, Haiyan Lin et al.             Rerouting of NADPH synthetic pathways for increased protopanaxadiol production in Saccharomyces cerevisiae ▶     Jae-Eung Kim, In-Seung Jang, Bong Hyun Sung et al.             The common origin of symmetry and structure in genetic sequences ▶     Giampaolo Cristadoro, Mirko Degli Esposti, Eduardo G. Altmann             Adipose tissue dysfunction is associated with low levels of the novel Palmitic Acid Hydroxystearic Acids ▶     Ann Hammarstedt, Ismail Syed, Archana Vijayakumar et al.             EzColocalization: An ImageJ plugin for visualizing and measuring colocalization in cells and organisms ▶     Weston Stauffer, Huanjie Sheng, Han N. Lim             GroEL/ES mediated the in vivo recovery of TRAIL inclusion bodies in Escherichia coli ▶     Zhanqing Wang, Min Zhang, Xin Lv et al.             Multi-population genomic analysis of malaria parasites indicates local selection and differentiation at the gdv1 locus regulating sexual development ▶     Craig W. Duffy, Alfred Amambua-Ngwa, Ambroise D. Ahouidi et al.             Milk Metabolomics Data Reveal the Energy Balance of Individual Dairy Cows in Early Lactation ▶     Wei Xu, Jacques Vervoort, Edoardo Saccenti et al.             The 3D architecture of a bacterial swarm has implications for antibiotic tolerance ▶     Jonathan D. Partridge, Gil Ariel, Orly Schvartz et al.             Nanogel tectonic porous 3D scaffold for direct reprogramming fibroblasts into osteoblasts and bone regeneration ▶     Yoshiki Sato, Kenta Yamamoto, Satoshi Horiguchi et al.             The complete mitochondrial genomes of two skipper genera (Lepidoptera: Hesperiidae) and their associated phylogenetic analysis ▶     Yuke Han, Zhenfu Huang, Jing Tang et al.             Angiotensin 1–7 modulates molecular and cellular processes central to the pathogenesis of prostate cancer ▶     Kamila Domińska, Piotr Okła, Karolina Kowalska et al.             Development and single dose clinical pharmacokinetics investigation of novel zein assisted- alpha lipoic acid nanoencapsulation of vardenafil ▶     Osama A. A. Ahmed             In-vitro evaluation of apoptotic effect of OEO and thymol in 2D and 3D cell cultures and the study of their interaction mode with DNA ▶     Tahereh Jamali, Gholamreza Kavoosi, Maliheh Safavi et al.             Ptf1a inactivation in adult pancreatic acinar cells causes apoptosis through activation of the endoplasmic reticulum stress pathway ▶     Morito Sakikubo, Kenichiro Furuyama, Masashi Horiguchi et al.             Dental pulp-derived stem cells can counterbalance peripheral nerve injury-induced oxidative stress and supraspinal neuro-inflammation in rat brain ▶     Imran Ullah, Yong-ho Choe, Mehtab Khan et al.             IL-6, IL-17 and Stat3 are required for auto-inflammatory syndrome development in mouse ▶     Takatsugu Oike, Hiroya Kanagawa, Yuiko Sato et al.             Antiproliferative activities of the second-generation antipsychotic drug sertindole against breast cancers with a potential application for treatment of breast-to-brain metastases ▶     Wei Zhang, Cunlong Zhang, Feng Liu et al.             Modelling Self-Organization in Complex Networks Via a Brain-Inspired Network Automata Theory Improves Link Reliability in Protein Interactomes ▶     Carlo Vittorio Cannistraci             Magnetic Resonance Imaging for tracking cellular patterns obtained by Laser-Assisted Bioprinting ▶     Olivia Kérourédan, Emeline Ribot, Jean-Christophe Fricain et al.             Hierarchical decision-making produces persistent differences in learning performance ▶     Thorbjørn Knudsen, Davide Marchiori, Massimo Warglien             Mouth gape determines the response of marine top predators to long-term fishery-induced changes in food web structure ▶     Massimiliano Drago, Valentina Franco-Trecu, Angel M. Segura et al.             Increase in prefrontal cortex oxygenation during static muscular endurance performance is modulated by self-regulation strategies ▶     Wanja Wolff, Maik Bieleke, Anna Hirsch et al.             Fibroblast gene expression following asthmatic bronchial epithelial cell conditioning correlates with epithelial donor lung function and exacerbation history ▶     Stephen R. Reeves, Kaitlyn A. Barrow, Tessa K. Kolstad et al.             Prediction of potential disease-associated microRNAs by composite network based inference ▶     Bin-Sheng He, Jia Qu, Min Chen             Microtubule plus-end tracking Adenopolyposis Coli negatively regulates proplatelet formation ▶     C. Strassel, S. Moog, L. Mallo et al.             A novel approach to create an antibacterial surface using titanium dioxide and a combination of dip-pen nanolithography and soft lithography ▶     Santiago Arango-Santander, Alejandro Pelaez-Vargas, Sidónio C. Freitas et al.             Effect of Deepwater Horizon Crude Oil Water Accommodated Fraction on Olfactory Function in the Atlantic Stingray, Hypanus sabinus ▶     Eloise J. Cave, Stephen M. Kajiura             Probing of G-Quadruplex Structures via Ligand-Sensitized Photochemical Reactions in BrU-Substituted DNA ▶     Abhijit Saha, Sophie Bombard, Anton Granzhan et al.             Identification of Novel Genes in Human Airway Epithelial Cells associated with Chronic Obstructive Pulmonary Disease (COPD) using Machine-Based Learning Algorithms ▶     Shayan Mostafaei, Anoshirvan Kazemnejad, Sadegh Azimzadeh Jamalkandi et al.             Peri-personal space as a prior in coupling visual and proprioceptive signals ▶     Jean-Paul Noel, Majed Samad, Andrew Doxon et al.             Repression of Mcl-1 expression by the CDC7/CDK9 inhibitor PHA-767491 overcomes bone marrow stroma-mediated drug resistance in AML ▶     Eimear O’ Reilly, Sukhraj Pal S. Dhami, Denis V. Baev et al.             The extracellular loop of Man-PTS subunit IID is responsible for the sensitivity of Lactococcus garvieae to garvicins A, B and C ▶     Aleksandra Tymoszewska, Dzung B. Diep, Tamara Aleksandrzak-Piekarczyk             Formation of neocortical memory circuits for unattended written word forms: neuromagnetic evidence ▶     Eino J. Partanen, Alina Leminen, Clare Cook et al.             Collective behavior of oscillating electric dipoles ▶     Simona Olmi, Matteo Gori, Irene Donato et al.             Enrichment and Quantification of Epitope-specific CD4+ T Lymphocytes using Ferromagnetic Iron-gold and Nickel Nanowires ▶     Daniel E. Shore, Thamotharampillai Dileepan, Jaime F. Modiano et al.             Understanding the mismatch between behaviour and development in a novel host-parasitoid association ▶     Joanna K. Konopka, Danny Poinapen, Tara Gariepy et al.             Longitudinal monoaminergic PET imaging of chronic proteasome inhibition in minipigs ▶     Thea P. Lillethorup, Andreas N. Glud, Aage K. O. Alstrup et al.             Homeostatic plasticity and emergence of functional networks in a whole-brain model at criticality ▶     Rodrigo P. Rocha, Loren Koçillari, Samir Suweis et al.             Prediction of high anti-angiogenic activity peptides in silico using a generalized linear model and feature selection ▶     Jose Liñares Blanco, Ana B. Porto-Pazos, Alejandro Pazos et al.             Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis ▶     Robert N. Kirchdoerfer, Nianshuang Wang, Jesper Pallesen et al.             Loss of progesterone receptor membrane component 1 promotes hepatic steatosis via the induced de novo lipogenesis ▶     Sang R. Lee, Sun Woo Kwon, Pelin Kaya et al.             The yeast GRASP Grh1 displays a high polypeptide backbone mobility along with an amyloidogenic behavior ▶     N. A. Fontana, R. Fonseca-Maldonado, L. F. S Mendes et al.             Combination of immune checkpoint blockade with DNA cancer vaccine induces potent antitumor immunity against P815 mastocytoma ▶     Alessandra Lopes, Kevin Vanvarenberg, Špela Kos et al.             The transcriptomic response of Streptococcus pneumoniae following exposure to cigarette smoke extract ▶     Sam Manna, Alicia Waring, Angelica Papanicolaou et al.             Locating human splenic capillary sheaths in virtual reality ▶     B. S. Steiniger, V. Wilhelmi, M. Berthold et al.             Effort and performance in a cooperative activity are boosted by perception of a partner’s effort ▶     Matthew Chennells, John Michael             Two alternatively-spliced human nebulin isoforms with either exon 143 or exon 144 and their developmental regulation ▶     Le Thanh Lam, Ian Holt, Jenni Laitila et al.             Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster ▶     Ezequiel Nazer, Ryan K. Dale, Cameron Palmer et al.             Diversity and relationships among strains of culturable yeasts in agricultural soils in Cameroon ▶     Renad Aljohani, Himeshi Samarasinghe, Tabi Ashu et al.             Metabolic fingerprints of Serratia liquefaciens under simulated Martian conditions using Biolog GN2 microarrays ▶     Petra Schwendner, Andrew C. Schuerger             Synthesis, characterization and in vitro biological evaluation of two matrine derivatives ▶     Xingan Cheng, Jingmin Ye, Huiqing He et al.             Target-distractor competition cannot be resolved across a saccade ▶     Kiki Arkesteijn, Jeroen B. J. Smeets, Mieke Donk et al.             Human Bronchial Epithelial Cells Inhibit Aspergillus fumigatus Germination of Extracellular Conidia via FleA Recognition ▶     Nicolas Richard, Léa Marti, Annabelle Varrot et al.             Characterizing Deformability of Drug Resistant Patient-Derived Acute Lymphoblastic Leukemia (ALL) Cells Using Acoustic Tweezers ▶     Hsiao-Chuan Liu, Eun Ji Gang, Hye Na Kim et al.             Compound tool construction by New Caledonian crows ▶     A. M. P. von Bayern, S. Danel, A. M. I. Auersperg et al.             Withaferin A inhibits Epithelial to Mesenchymal Transition in Non-Small Cell Lung Cancer Cells ▶     Al Hassan Kyakulaga, Farrukh Aqil, Radha Munagala et al.             Establishment of a dual-wavelength spectrophotometric method for analysing and detecting carbapenemase-producing Enterobacteriaceae ▶     Dan Takeuchi, Yukihiro Akeda, Yo Sugawara et al.             Targeting Mitochondrial Oxidative Phosphorylation Abrogated Irinotecan Resistance in NSCLC ▶     Soohyun Lee, Jae-Seon Lee, Jinho Seo et al.             SMTracker: a tool for quantitative analysis, exploration and visualization of single-molecule tracking data reveals highly dynamic binding of B. subtilis global repressor AbrB throughout the genome ▶     Thomas C. Rösch, Luis M. Oviedo-Bocanegra, Georg Fritz et al.             Angiogenic and Osteogenic Synergy of Human Mesenchymal Stem Cells and Human Umbilical Vein Endothelial Cells Cocultured on a Nanomatrix ▶     Jun Chen, Lily Deng, Catherine Porter et al.             OsARD4 encoding an acireductone dioxygenase improves root architecture in rice by promoting development of secondary roots ▶     Valarmathi Ramanathan, Hifzur Rahman, Saravanan Subramanian et al.             Imaging of Pseudomonas aeruginosa infection with Ga-68 labelled pyoverdine for positron emission tomography ▶     Milos Petrik, Eva Umlaufova, Vladislav Raclavsky et al.             Improving Protein Gamma-Turn Prediction Using Inception Capsule Networks ▶     Chao Fang, Yi Shang, Dong Xu             Aptamer-enabled uptake of small molecule ligands ▶     Supipi Liyamali Auwardt, Yeon-Jung Seo, Muslum Ilgu et al.             Dose-compatible grating-based phase-contrast mammography on mastectomy specimens using a compact synchrotron source ▶     Elena Eggl, Susanne Grandl, Anikό Sztrόkay-Gaul et al.             Multisensory integration in rodent tactile but not visual thalamus ▶     Malte Bieler, Xiaxia Xu, Annette Marquardt et al.             Frequencies of poor metabolizer alleles of 12 pharmacogenomic actionable genes in Punjabi Sikhs of Indian Origin ▶     Dharambir K. Sanghera, Cynthia Bejar, Bishwa Sapkota et al.             Evaluation of the cardioprotective potential of extracellular vesicles – a systematic review and meta-analysis ▶     Sebastian Wendt, Andreas Goetzenich, Claudia Goettsch et al.             The roles of IL-17C in T cell-dependent and -independent inflammatory diseases ▶     Sachiko Yamaguchi, Aya Nambu, Takafumi Numata et al.             The first set of universal nuclear protein-coding loci markers for avian phylogenetic and population genetic studies ▶     Yang Liu, Simin Liu, Chia-Fen Yeh et al.             Case studies on potential G-quadruplex-forming sequences from the bacterial orders Deinococcales and Thermales derived from a survey of published genomes ▶     Yun Ding, Aaron M. Fleming, Cynthia J. Burrows             How body motion influences echolocation while walking ▶     Alessia Tonelli, Claudio Campus, Luca Brayda             Acoustophoretic Orientation of Red Blood Cells for Diagnosis of Red Cell Health and Pathology ▶     Laura G. Rico, Jordi Juncà, Mike D. Ward et al.             Rapid degradation of progressive ankylosis protein (ANKH) in craniometaphyseal dysplasia ▶     Jitendra Kanaujiya, Edward Bastow, Raj Luxmi et al.             Successful cryopreservation of coral larvae using vitrification and laser warming ▶     Jonathan Daly, Nikolas Zuchowicz, C. Isabel Nuñez Lendo et al.                 • Scientific Reports events Directory featured events           natureevents directory featured events         Cold Spring Harbor Asia Conference on Single Cell     05.11.18 Suzhou, China         Natureevents Directory is the premier resource for scientists looking for the latest scientific conferences, courses, meetings and symposia. 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