The ISME Journal - Table of Contents alert Volume 10 Issue 7

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TABLE OF CONTENTS Volume 10, Issue 7 (July 2016) In this issue Original Articles Short Communication Also new AOP Sign up for e-alerts Recommend to your library Web feed Subscribe Advertisement Visit us in Montreal at the 16th International Symposium on Microbial Ecology! Come and pick up free copies of The ISME Journal (ISMEJ), branded pens, post-it notes, stressballs, how to get published booklets and more at The ISME Society booth in Montreal, 21-26 August 2016. Click here to visit the ISMEJ homepage for more news and information Original Articles Top Shifts in diversity and function of lake bacterial communities upon glacier retreat OPEN Hannes Peter and Ruben Sommaruga ISME J 2016 10: 1545-1554; advance online publication, January 15, 2016; 10.1038/ismej.2015.245 Abstract | Full Text Niche partitioning and biogeography of high light adapted Prochlorococcus across taxonomic ranks in the North Pacific Alyse A Larkin, Sara K Blinebry, Caroline Howes, Yajuan Lin, Sarah E Loftus, Carrie A Schmaus, Erik R Zinser and Zackary I Johnson ISME J 2016 10: 1555-1567; advance online publication, January 22, 2016; 10.1038/ismej.2015.244 Abstract | Full Text Segregating metabolic processes into different microbial cells accelerates the consumption of inhibitory substrates Elin E Lilja and David R Johnson ISME J 2016 10: 1568-1578; advance online publication, January 15, 2016; 10.1038/ismej.2015.243 Abstract | Full Text Single-cell activity of freshwater aerobic anoxygenic phototrophic bacteria and their contribution to biomass production Maria C Garcia-Chaves, Matthew T Cottrell, David L Kirchman, Clara Ruiz-González and Paul A del Giorgio ISME J 2016 10: 1579-1588; advance online publication, January 15, 2016; 10.1038/ismej.2015.242 Abstract | Full Text Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations OPEN Matthew L Bendall, Sarah LR Stevens, Leong-Keat Chan, Stephanie Malfatti, Patrick Schwientek, Julien Tremblay, Wendy Schackwitz, Joel Martin, Amrita Pati, Brian Bushnell, Jeff Froula, Dongwan Kang, Susannah G Tringe, Stefan Bertilsson, Mary A Moran, Ashley Shade, Ryan J Newton, Katherine D McMahon and Rex R Malmstrom ISME J 2016 10: 1589-1601; advance online publication, January 8, 2016; 10.1038/ismej.2015.241 Abstract | Full Text Seasonal determinations of algal virus decay rates reveal overwintering in a temperate freshwater pond Andrew M Long and Steven M Short ISME J 2016 10: 1602-1612; advance online publication, March 4, 2016; 10.1038/ismej.2015.240 Abstract | Full Text Nearing the cold-arid limits of microbial life in permafrost of an upper dry valley, Antarctica OPEN Jacqueline Goordial, Alfonso Davila, Denis Lacelle, Wayne Pollard, Margarita M Marinova, Charles W Greer, Jocelyn DiRuggiero, Christopher P McKay and Lyle G Whyte ISME J 2016 10: 1613-1624; advance online publication, January 19, 2016; 10.1038/ismej.2015.239 Abstract | Full Text Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier Thomas Rime, Martin Hartmann and Beat Frey ISME J 2016 10: 1625-1641; advance online publication, January 15, 2016; 10.1038/ismej.2015.238 Abstract | Full Text Complete ecological isolation and cryptic diversity in Polynucleobacter bacteria not resolved by 16S rRNA gene sequences OPEN Martin W Hahn, Jitka Jezberová, Ulrike Koll, Tanja Saueressig-Beck and Johanna Schmidt ISME J 2016 10: 1642-1655; advance online publication, March 4, 2016; 10.1038/ismej.2015.237 Abstract | Full Text Deciphering bifidobacterial-mediated metabolic interactions and their impact on gut microbiota by a multi-omics approach Francesca Turroni, Christian Milani, Sabrina Duranti, Leonardo Mancabelli, Marta Mangifesta, Alice Viappiani, Gabriele Andrea Lugli, Chiara Ferrario, Laura Gioiosa, Alberto Ferrarini, Jia Li, Paola Palanza, Massimo Delledonne, Douwe van Sinderen and Marco Ventura ISME J 2015 10: 1656-1668; advance online publication, February 9, 2016; 10.1038/ismej.2015.236 Abstract | Full Text Correlation detection strategies in microbial data sets vary widely in sensitivity and precision Sophie Weiss, Will Van Treuren, Catherine Lozupone, Karoline Faust, Jonathan Friedman, Ye Deng, Li Charlie Xia, Zhenjiang Zech Xu, Luke Ursell, Eric J Alm, Amanda Birmingham, Jacob A Cram, Jed A Fuhrman, Jeroen Raes, Fengzhu Sun, Jizhong Zhou and Rob Knight ISME J 2016 10: 1669-1681; advance online publication, February 23, 2016; 10.1038/ismej.2015.235 Abstract | Full Text Skin bacterial diversity of Panamanian frogs is associated with host susceptibility and presence of Batrachochytrium dendrobatidis Eria A Rebollar, Myra C Hughey, Daniel Medina, Reid N Harris, Roberto Ibáñez and Lisa K Belden ISME J 2016 10: 1682-1695; advance online publication, January 8, 2016; 10.1038/ismej.2015.234 Abstract | Full Text Genomic reconstruction of a novel, deeply branched sediment archaeal phylum with pathways for acetogenesis and sulfur reduction Kiley W Seitz, Cassandre S Lazar, Kai-Uwe Hinrichs, Andreas P Teske and Brett J Baker ISME J 2016 10: 1696-1705; advance online publication, January 29, 2016; 10.1038/ismej.2015.233 Abstract | Full Text Quorum sensing protects bacterial co-operation from exploitation by cheats OPEN Richard C Allen, Luke McNally, Roman Popat and Sam P Brown ISME J 2016 10: 1706-1716; advance online publication, January 8, 2016; 10.1038/ismej.2015.232 Abstract | Full Text Deciphering associations between dissolved organic molecules and bacterial communities in a pelagic marine system Helena Osterholz, Gabriel Singer, Bernd Wemheuer, Rolf Daniel, Meinhard Simon, Jutta Niggemann and Thorsten Dittmar ISME J 2016 10: 1717-1730; advance online publication, January 22, 2016; 10.1038/ismej.2015.231 Abstract | Full Text Contributions of ancestral inter-species recombination to the genetic diversity of extant Streptomyces lineages Cheryl P Andam, Mallory J Choudoir, Anh Vinh Nguyen, Han Sol Park and Daniel H Buckley ISME J 2015 10: 1731-1741; advance online publication, February 5, 2016; 10.1038/ismej.2015.230 Abstract | Full Text Modulation of host ROS metabolism is essential for viral infection of a bloom-forming coccolithophore in the ocean Uri Sheyn, Shilo Rosenwasser, Shifra Ben-Dor, Ziv Porat and Assaf Vardi ISME J 2016 10: 1742-1754; advance online publication, January 19, 2016; 10.1038/ismej.2015.228 Abstract | Full Text Interactions between hydrology and water chemistry shape bacterioplankton biogeography across boreal freshwater networks Juan Pablo Niño-García, Clara Ruiz-González and Paul A del Giorgio ISME J 2016 10: 1755-1766; advance online publication, February 5, 2016; 10.1038/ismej.2015.226 Abstract | Full Text An evidence-based framework for predicting the impact of differing autotroph-heterotroph thermal sensitivities on consumer–prey dynamics OPEN Zhou Yang, Lu Zhang, Xuexia Zhu, Jun Wang and David J S Montagnes ISME J 2015 10: 1767-1778; advance online publication, December 18, 2015; 10.1038/ismej.2015.225 Abstract | Full Text Patterns and processes in microbial biogeography: do molecules and morphologies give the same answers? Luciana F Santoferrara, Jean-David Grattepanche, Laura A Katz and George B McManus ISME J 2015 10: 1779-1790; advance online publication, February 5, 2016; 10.1038/ismej.2015.224 Abstract | Full Text Emerging pathogens of gilthead seabream: characterisation and genomic analysis of novel intracellular β-proteobacteria Helena M B Seth-Smith, Nancy Dourala, Alexander Fehr, Weihong Qi, Pantelis Katharios, Maja Ruetten, José M Mateos, Lisbeth Nufer, Roseline Weilenmann, Urs Ziegler, Nicholas R Thomson, Ralph Schlapbach and Lloyd Vaughan ISME J 2016 10: 1791-1803; advance online publication, February 5, 2016; 10.1038/ismej.2015.223 Abstract | Full Text Short Communication Top Imaging the uptake of nitrogen-fixing bacteria into larvae of the coral Acropora millepora Kimberley A Lema, Peta L Clode, Matt R Kilburn, Ruth Thornton, Bette L Willis and David G Bourne ISME J 2015 10: 1804-1808; advance online publication, December 22, 2015; 10.1038/ismej.2015.229 Abstract | Full Text Advertisement Most influential ISMEJ articles of 2016 thus far according to Altmetric.com Cigarette smoking and the oral microbiome in a large study of American adults Nearing the cold-arid limits of microbial life in permafrost of an upper dry valley, Antarctica Rapid evolution of microbe-mediated protection against pathogens in a worm host  Information on how Altmetric score articles can be found here   Natureevents is a fully searchable, multi-disciplinary database designed to maximise exposure for events organisers. 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