The ISME Journal - Table of Contents alert Volume 10 Issue 5

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TABLE OF CONTENTS Volume 10, Issue 5 (May 2016) In this issue Commentary Original Articles Short Communications Also new AOP Sign up for e-alerts Recommend to your library Web feed Subscribe Commentary Top Towards biome-specific analysis of meta-omics data OPEN Youssef Darzi, Gwen Falony, Sara Vieira-Silva and Jeroen Raes ISME J 2016 10: 1025-1028; advance online publication, December 1, 2015; 10.1038/ismej.2015.188 Full Text Original Articles Top The allometry of the smallest: superlinear scaling of microbial metabolic rates in the Atlantic Ocean OPEN Francisca C García, Enma Elena García-Martín, Fernando González Taboada, Sofía Sal, Pablo Serret and Ángel López-Urrutia ISME J 2016 10: 1029-1036; advance online publication, December 4, 2015; 10.1038/ismej.2015.203 Abstract | Full Text The dual oxidase gene BdDuox regulates the intestinal bacterial community homeostasis of Bactrocera dorsalis Zhichao Yao, Ailin Wang, Yushan Li, Zhaohui Cai, Bruno Lemaitre and Hongyu Zhang ISME J 2016 10: 1037-1050; advance online publication, November 13, 2015; 10.1038/ismej.2015.202 Abstract | Full Text Physiological and genomic characterization of two novel marine thaumarchaeal strains indicates niche differentiation OPEN Barbara Bayer, Jana Vojvoda, Pierre Offre, Ricardo J E Alves, Nathalie H Elisabeth, Juan AL Garcia, Jean-Marie Volland, Abhishek Srivastava, Christa Schleper and Gerhard J Herndl ISME J 2016 10: 1051-1063; advance online publication, November 3, 2015; 10.1038/ismej.2015.200 Abstract | Full Text Legionella species diversity and dynamics from surface reservoir to tap water: from cold adaptation to thermophily René Lesnik, Ingrid Brettar and Manfred G Höfle ISME J 2016 10: 1064-1080; advance online publication, November 3, 2015; 10.1038/ismej.2015.199 Abstract | Full Text Respiratory microbiota resistance and resilience to pulmonary exacerbation and subsequent antimicrobial intervention OPEN Leah Cuthbertson, Geraint B Rogers, Alan W Walker, Anna Oliver, Laura E Green, Thomas W V Daniels, Mary P Carroll, Julian Parkhill, Kenneth D Bruce and Christopher J van der Gast ISME J 2016 10: 1081-1091; advance online publication, November 10, 2015; 10.1038/ismej.2015.198 Abstract | Full Text The corrinoid cofactor of reductive dehalogenases affects dechlorination rates and extents in organohalide-respiring Dehalococcoides mccartyi Jun Yan, Burcu Şimşir, Abigail T Farmer, Meng Bi, Yi Yang, Shawn R Campagna and Frank E Löffler ISME J 2016 10: 1092-1101; advance online publication, November 10, 2015; 10.1038/ismej.2015.197 Abstract | Full Text Proteorhodopsin light-enhanced growth linked to vitamin-B1 acquisition in marine Flavobacteria Laura Gómez-Consarnau, José M González, Thomas Riedel, Sebastian Jaenicke, Irene Wagner-Döbler, Sergio A Sañudo-Wilhelmy and Jed A Fuhrman ISME J 2016 10: 1102-1112; advance online publication, November 17, 2015; 10.1038/ismej.2015.196 Abstract | Full Text Diversification of DnaA dependency for DNA replication in cyanobacterial evolution Ryudo Ohbayashi, Satoru Watanabe, Shigeki Ehira, Yu Kanesaki, Taku Chibazakura and Hirofumi Yoshikawa ISME J 2016 10: 1113-1121; advance online publication, October 30, 2015; 10.1038/ismej.2015.194 Abstract | Full Text Transcription factor levels enable metabolic diversification of single cells of environmental bacteria Raúl Guantes, Ilaria Benedetti, Rafael Silva-Rocha and Víctor de Lorenzo ISME J 2016 10: 1122-1133; advance online publication, December 4, 2015; 10.1038/ismej.2015.193 Abstract | Full Text Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages OPEN Magali Lescot, Pascal Hingamp, Kenji K Kojima, Emilie Villar, Sarah Romac, Alaguraj Veluchamy, Martine Boccara, Olivier Jaillon, Daniele Iudicone, Chris Bowler, Patrick Wincker, Jean-Michel Claverie and Hiroyuki Ogata ISME J 2016 10: 1134-1146; advance online publication, November 27, 2015; 10.1038/ismej.2015.192 Abstract | Full Text Decreases in average bacterial community rRNA operon copy number during succession OPEN Diana R Nemergut, Joseph E Knelman, Scott Ferrenberg, Teresa Bilinski, Brett Melbourne, Lin Jiang, Cyrille Violle, John L Darcy, Tiffany Prest, Steven K Schmidt and Alan R Townsend ISME J 2016 10: 1147-1156; advance online publication, November 13, 2015; 10.1038/ismej.2015.191 Abstract | Full Text Stable and sporadic symbiotic communities of coral and algal holobionts OPEN Eric R Hester, Katie L Barott, Jim Nulton, Mark JA Vermeij and Forest L Rohwer ISME J 2016 10: 1157-1169; advance online publication, November 10, 2015; 10.1038/ismej.2015.190 Abstract | Full Text The effect of microbial colonization on the host proteome varies by gastrointestinal location Joshua S Lichtman, Emily Alsentzer, Mia Jaffe, Daniel Sprockett, Evan Masutani, Elvis Ikwa, Gabriela K Fragiadakis, David Clifford, Bevan Emma Huang, Justin L Sonnenburg, Kerwyn Casey Huang and Joshua E Elias ISME J 2016 10: 1170-1181; advance online publication, November 17, 2015; 10.1038/ismej.2015.187 Abstract | Full Text Superinfection exclusion and the long-term survival of honey bees in Varroa-infested colonies OPEN Gideon J Mordecai, Laura E Brettell, Stephen J Martin, David Dixon, Ian M Jones and Declan C Schroeder ISME J 2016 10: 1182-1191; advance online publication, October 27, 2015; 10.1038/ismej.2015.186 Abstract | Full Text Microbial metagenomes from three aquifers in the Fennoscandian shield terrestrial deep biosphere reveal metabolic partitioning among populations OPEN Xiaofen Wu, Karin Holmfeldt, Valerie Hubalek, Daniel Lundin, Mats Åström, Stefan Bertilsson and Mark Dopson ISME J 2016 10: 1192-1203; advance online publication, October 20, 2015; 10.1038/ismej.2015.185 Abstract | Full Text Microbiome shifts and the inhibition of quorum sensing by Black Band Disease cyanobacteria Julie L Meyer, Sarath P Gunasekera, Raymond M Scott, Valerie J Paul and Max Teplitski ISME J 2016 10: 1204-1216; advance online publication, October 23, 2015; 10.1038/ismej.2015.184 Abstract | Full Text Divergent responses of viral and bacterial communities in the gut microbiome to dietary disturbances in mice OPEN Adina Howe, Daina L Ringus, Ryan J Williams, Zi-Ning Choo, Stephanie M Greenwald, Sarah M Owens, Maureen L Coleman, Folker Meyer and Eugene B Chang ISME J 2016 10: 1217-1227; advance online publication, October 16, 2015; 10.1038/ismej.2015.183 Abstract | Full Text Ectomycorrhizal fungal spore bank recovery after a severe forest fire: some like it hot Sydney I Glassman, Carrie R Levine, Angela M DiRocco, John J Battles and Thomas D Bruns ISME J 2016 10: 1228-1239; advance online publication, October 16, 2015; 10.1038/ismej.2015.182 Abstract | Full Text Cyanobacterial reuse of extracellular organic carbon in microbial mats OPEN Rhona K Stuart, Xavier Mayali, Jackson Z Lee, R Craig Everroad, Mona Hwang, Brad M Bebout, Peter K Weber, Jennifer Pett-Ridge and Michael P Thelen ISME J 2016 10: 1240-1251; advance online publication, October 23, 2015; 10.1038/ismej.2015.180 Abstract | Full Text Effects of low temperature on tropical and temperate isolates of marine Synechococcus Deepa Varkey, Sophie Mazard, Martin Ostrowski, Sasha G Tetu, Paul Haynes and Ian T Paulsen ISME J 2016 10: 1252-1263; advance online publication, October 23, 2015; 10.1038/ismej.2015.179 Abstract | Full Text Diversity in a honey bee pathogen: first report of a third master variant of the Deformed Wing Virus quasispecies OPEN Gideon J Mordecai, Lena Wilfert, Stephen J Martin, Ian M Jones and Declan C Schroeder ISME J 2016 10: 1264-1273; advance online publication, November 17, 2015; 10.1038/ismej.2015.178 Abstract | Full Text Short Communications Top In situ phenotypic heterogeneity among single cells of the filamentous bacterium Candidatus Microthrix parvicella OPEN Abdul R Sheik, Emilie EL Muller, Jean-Nicolas Audinot, Laura A Lebrun, Patrick Grysan, Cedric Guignard and Paul Wilmes ISME J 2016 10: 1274-1279; advance online publication, October 27, 2015; 10.1038/ismej.2015.181 Abstract | Full Text The biogeography of the atlantic salmon (Salmo salar) gut microbiome Martin S Llewellyn, Philip McGinnity, Melanie Dionne, Justine Letourneau, Florian Thonier, Gary R Carvalho, Simon Creer and Nicolas Derome ISME J 2016 10: 1280-1284; advance online publication, October 30, 2015; 10.1038/ismej.2015.189 Abstract | Full Text Natureevents is a fully searchable, multi-disciplinary database designed to maximise exposure for events organisers. 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