The ISME Journal - Table of Contents alert Volume 9 Issue 6

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TABLE OF CONTENTS Volume 9, Issue 6 (June 2015) In this issue Perspective Original Articles Short Communication Also new AOP Sign up for e-alerts Recommend to your library Web feed Subscribe Perspective Top Using the class 1 integron-integrase gene as a proxy for anthropogenic pollution OPEN Michael R Gillings, William H Gaze, Amy Pruden, Kornelia Smalla, James M Tiedje and Yong-Guan Zhu ISME J 2015 9: 1269-1279; advance online publication, December 12, 2014; 10.1038/ismej.2014.226 Abstract | Full Text Original Articles Top Ecological roles of dominant and rare prokaryotes in acid mine drainage revealed by metagenomics and metatranscriptomics OPEN Zheng-Shuang Hua, Yu-Jiao Han, Lin-Xing Chen, Jun Liu, Min Hu, Sheng-Jin Li, Jia-Liang Kuang, Patrick SG Chain, Li-Nan Huang and Wen-Sheng Shu ISME J 2015 9: 1280-1294; advance online publication, November 7, 2014; 10.1038/ismej.2014.212 Abstract | Full Text Mechanisms of direct inhibition of the respiratory sulfate-reduction pathway by (per)chlorate and nitrate Hans K Carlson, Jennifer V Kuehl, Amrita B Hazra, Nicholas B Justice, Magdalena K Stoeva, Andrew Sczesnak, Mark R Mullan, Anthony T Iavarone, Anna Engelbrektson, Morgan N Price, Adam M Deutschbauer, Adam P Arkin and John D Coates ISME J 2015 9: 1295-1305; advance online publication, November 18, 2014; 10.1038/ismej.2014.216 Abstract | Full Text Spatial scales of bacterial community diversity at cold seeps (Eastern Mediterranean Sea) OPEN Petra Pop Ristova, Frank Wenzhöfer, Alban Ramette, Janine Felden and Antje Boetius ISME J 2015 9: 1306-1318; advance online publication, December 12, 2014; 10.1038/ismej.2014.217 Abstract | Full Text Significance of archaeal nitrification in hypoxic waters of the Baltic Sea Carlo Berg, Verona Vandieken, Bo Thamdrup and Klaus Jürgens ISME J 2015 9: 1319-1332; advance online publication, November 25, 2014; 10.1038/ismej.2014.218 Abstract | Full Text Is there a common water-activity limit for the three domains of life? OPEN Andrew Stevenson, Jonathan A Cray, Jim P Williams, Ricardo Santos, Richa Sahay, Nils Neuenkirchen, Colin D McClure, Irene R Grant, Jonathan DR Houghton, John P Quinn, David J Timson, Satish V Patil, Rekha S Singhal, Josefa Antón, Jan Dijksterhuis, Ailsa D Hocking, Bart Lievens, Drauzio E N Rangel, Mary A Voytek, Nina Gunde-Cimerman, Aharon Oren, Kenneth N Timmis, Terry J McGenity and John E Hallsworth ISME J 2015 9: 1333-1351; advance online publication, December 12, 2014; 10.1038/ismej.2014.219 Abstract | Full Text A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes Joshua S Weitz, Charles A Stock, Steven W Wilhelm, Lydia Bourouiba, Maureen L Coleman, Alison Buchan, Michael J Follows, Jed A Fuhrman, Luis F Jover, Jay T Lennon, Mathias Middelboe, Derek L Sonderegger, Curtis A Suttle, Bradford P Taylor, T Frede Thingstad, William H Wilson and K Eric Wommack ISME J 2015 9: 1352-1364; advance online publication, January 30, 2015; 10.1038/ismej.2014.220 Abstract | Full Text Life-cycle modification in open oceans accounts for genome variability in a cosmopolitan phytoplankton OPEN Peter von Dassow, Uwe John, Hiroyuki Ogata, Ian Probert, El Mahdi Bendif, Jessica U Kegel, Stéphane Audic, Patrick Wincker, Corinne Da Silva, Jean-Michel Claverie, Scott Doney, David M Glover, Daniella Mella Flores, Yeritza Herrera, Magali Lescot, Marie-José Garet-Delmas and Colomban de Vargas ISME J 2015 9: 1365-1377; advance online publication, December 2, 2014; 10.1038/ismej.2014.221 Abstract | Full Text Bacterial community responses to a gradient of alkaline mountaintop mine drainage in Central Appalachian streams Raven L Bier, Kristofor A Voss and Emily S Bernhardt ISME J 2015 9: 1378-1390; advance online publication, December 12, 2014; 10.1038/ismej.2014.222 Abstract | Full Text Lytic activity by temperate phages of Pseudomonas aeruginosa in long-term cystic fibrosis chronic lung infections OPEN Chloe E James, Emily V Davies, Joanne L Fothergill, Martin J Walshaw, Colin M Beale, Michael A Brockhurst and Craig Winstanley ISME J 2015 9: 1391-1398; advance online publication, December 2, 2014; 10.1038/ismej.2014.223 Abstract | Full Text Sudden motility reversal indicates sensing of magnetic field gradients in Magnetospirillum magneticum AMB-1 strain Lina M González, Warren C Ruder, Aaron P Mitchell, William C Messner and Philip R LeDuc ISME J 2015 9: 1399-1409; advance online publication, December 5, 2014; 10.1038/ismej.2014.224 Abstract | Full Text Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom Peng Xing, Richard L Hahnke, Frank Unfried, Stephanie Markert, Sixing Huang, Tristan Barbeyron, Jens Harder, Dörte Becher, Thomas Schweder, Frank Oliver Glöckner, Rudolf I Amann and Hanno Teeling ISME J 2015 9: 1410-1422; advance online publication, December 5, 2014; 10.1038/ismej.2014.225 Abstract | Full Text Evolutionary origin of a streamlined marine bacterioplankton lineage Haiwei Luo ISME J 2015 9: 1423-1433; advance online publication, November 28, 2014; 10.1038/ismej.2014.227 Abstract | Full Text Spatially resolved sampling reveals dynamic microbial communities in rising hydrothermal plumes across a back-arc basin Cody S Sheik, Karthik Anantharaman, John A Breier, Jason B Sylvan, Katrina J Edwards and Gregory J Dick ISME J 2015 9: 1434-1445; advance online publication, December 9, 2014; 10.1038/ismej.2014.228 Abstract | Full Text Fundamental shift in vitamin B12 eco-physiology of a model alga demonstrated by experimental evolution Katherine E Helliwell, Sinéad Collins, Elena Kazamia, Saul Purton, Glen L Wheeler and Alison G Smith ISME J 2015 9: 1446-1455; advance online publication, December 19, 2014; 10.1038/ismej.2014.230 Abstract | Full Text Aerobic and anaerobic nitrogen transformation processes in N2-fixing cyanobacterial aggregates Isabell Klawonn, Stefano Bonaglia, Volker Brüchert and Helle Ploug ISME J 2015 9: 1456-1466; advance online publication, January 9, 2015; 10.1038/ismej.2014.232 Abstract | Full Text Validated predictive modelling of the environmental resistome OPEN Gregory CA Amos, Emma Gozzard, Charlotte E Carter, Andrew Mead, Mike J Bowes, Peter M Hawkey, Lihong Zhang, Andrew C Singer, William H Gaze and Elizabeth M H Wellington ISME J 2015 9: 1467-1476; advance online publication, February 13, 2015; 10.1038/ismej.2014.237 Abstract | Full Text Short Communication Top Linking soil bacterial biodiversity and soil carbon stability Rebecca L Mau, Cindy M Liu, Maliha Aziz, Egbert Schwartz, Paul Dijkstra, Jane C Marks, Lance B Price, Paul Keim and Bruce A Hungate ISME J 2015 9: 1477-1480; advance online publication, October 28, 2014; 10.1038/ismej.2014.205 Abstract | Full Text Natureevents is a fully searchable, multi-disciplinary database designed to maximise exposure for events organisers. 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