Monday, October 3, 2011

EMBO Reports - Table of Contents alert Volume 12 Issue 10, pp 981-1084


TABLE OF CONTENTS

October 2011 | Volume 12, Issue 10

Upfront
Science & Society
Review
Scientific Reports

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The EMBO Journal Web Focus 2011

Our 2011 Focus issue comprises eight reviews united by a common interest in understanding how and why cells move cargo around.

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Upfront

Top

Editorial

These are your rights

Science is a vocation, not a job, and requires a degree of dedication and sacrifice that does not apply in a standard workplace. Howy proposes that we should be more upfront about this brutal reality when advising prospective scientists about their career choices.

Howy Jacobs

EMBO reports (2011), 12, 981; 10.1038/embor.2011.180

Abstract | Full text | PDF

Published online: 30 September 2011

Subject Categories: Scientific Training & Careers

Opinion

Unended knights' tournaments

Richard Dawkins introduced a generation of biologists to the influential idea of ‘selfish genes’. But the implicit genocentrism of his hypothesis is increasingly challenged.

Ladislav Kováč

EMBO reports (2011), 12, 982; 10.1038/embor.2011.181

Abstract | Full text | PDF

Published online: 09 September 2011

Subject Categories: Evolution, Environment & Agriculture

Hot off the Press

The structural diversity in α1-antitrypsin misfolding

The structure of α1-antitrypsin polymers, which cause a devastating disease, is vigorously debated. Here, the state of the field is discussed in view of a paradigm-changing structure published in this issue of EMBO reports.

Stephen P Bottomley

EMBO reports (2011), 12, 983 - 984; 10.1038/embor.2011.187

Abstract | Full text | PDF

Published online: 16 September 2011

Subject Categories: Molecular Biology of Disease | Structural Biology | Proteins

Metabolic signals regulate SIRT1 expression

SIRT1 is a key metabolic regulator in response to nutrient availability. Here, Chalkiadaki and Guarente comment on a report published online this month in which J. Auwerx and colleagues show how SIRT1 transcription is controlled by the antagonistic actions of CREB and ChREBP in response to the energetic status of the cell.

Angeliki Chalkiadaki and Leonard Guarente

EMBO reports (2011), 12, 985 - 986; 10.1038/embor.2011.179

Abstract | Full text | PDF

Published online: 23 September 2011

Subject Categories: Cellular Metabolism

Meeting Point

Lineage commitments: emphasis on embryonic–extraembryonic interfaces

The EMBO Workshop on ‘Lineage Commitments: Emphasis on Embryonic–Extraembryonic Interfaces’, held in May 2011, demonstrated that embryonic and extraembryonic tissues play early and significant interacting roles that mutually promote each other's further and correct deployment within the mammalian conceptus.

Karen M Downs

EMBO reports (2011), 12, 987 - 990; 10.1038/embor.2011.186

Abstract | Full text | PDF

Published online: 23 September 2011

Correspondence

Of mice and men

Thomas Erren and colleagues point out that studies on light and circadian rhythmicity in humans have their own interesting pitfalls, of which all researchers should be mindful.

Thomas C Erren, J Valérie Groß, Melissa S Koch and V Benno Meyer-Rochow

EMBO reports (2011), 12, 991; 10.1038/embor.2011.185

Abstract | Full text | PDF

Published online: 16 September 2011

Science & Society

Top

Outlook

Stem-cell tourism and scientific responsibility

Stem-cell tourism exploits the hope of patients desperate for therapies and cures. Scientists have both a special responsibility and a unique role to play in addressing this problem.

Zubin Master and David B Resnik

EMBO reports (2011), 12, 992 - 995; 10.1038/embor.2011.156

Abstract | Full text | PDF

Published online: 29 July 2011

Subject Categories: Ethics | Technology, Development & Applications

Dismay with GM maize

New discoveries often raise new problems or meet with public resistance. Rather than giving up on technologies such as genetically modified organisms, we should use science to develop them further and make them safer.

Gerhart U Ryffel

EMBO reports (2011), 12, 996 - 999; 10.1038/embor.2011.182

Abstract | Full text | PDF

Published online: 09 September 2011

Subject Categories: Genetically Modified Organisms | Philosophy & History of Science

Feature

The cost of living longer

There is an ancient balance struck between immunity and fertility. The ongoing trend in developed societies to have fewer children and later in life, might influence human life expectancy and disease susceptibility.

Philip Hunter

EMBO reports (2011), 12, 1000 - 1002; 10.1038/embor.2011.183

Abstract | Full text | PDF

Published online: 16 September 2011

Subject Categories: Health & Disease | Evolution, Environment & Agriculture

Review

Top

Review

The interplay between morphogens and tissue growth

Morphogens are long known diffusible molecules that regulate organ patterning and size in animals. The authors discuss in this review recent findings concerning the reciprocal interactions between tissue growth and morphogen signalling and how these interactions may help specify cellular fates, organ size and even organ shape.

Andrés Dekanty and Marco Milán

EMBO reports (2011), 12, 1003 - 1010; 10.1038/embor.2011.172

Abstract | Full text | PDF

Published online: 02 September 2011

Subject Categories: Development

Scientific Reports

Top

Molecular basis of α1-antitrypsin deficiency revealed by the structure of a domain-swapped trimer

The structure of the toxic oligomeric species of α1-antitrypsin is unexpectedly different from what had been proposed and enabled by the domain swap of the carboxy-terminal 34 residues. Such oligomers react with an antibody that recognizes aggregates in patients and are shown to occur in vivo.

Masayuki Yamasaki, Timothy J Sendall, Mary C Pearce, James C Whisstock and James A Huntington

EMBO reports (2011), 12, 1011 - 1017; 10.1038/embor.2011.171

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 09 September 2011

Subject Categories: Molecular Biology of Disease | Structural Biology

The transcription factor Krox20 is an E3 ligase that sumoylates its Nab coregulators

Krox20—a key regulator of hindbrain development—is shown to have SUMO E3 ligase activity towards Nab proteins, which are Krox20 coregulators. Nab SUMOylation enhances the repression of endogenous targets by the Krox20:Nab complex.

Pablo García-Gutiérrez, Francisco Juárez-Vicente, Francisco Gallardo-Chamizo, Patrick Charnay and Mario García-Domínguez

EMBO reports (2011), 12, 1018 - 1023; 10.1038/embor.2011.152

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 12 August 2011

Subject Categories: Chromatin & Transcription | Proteins

The mRNA export factor Npl3 mediates the nuclear export of large ribosomal subunits

This study reports the discovery of a new function of the mRNA export factor Npl3 in mediating pre-60S ribosomal subunit export. Npl3 interacts with the 25S rRNA, ribosomal and ribosome-associated proteins, and with the nuclear pore complex.

Alexandra Hackmann, Thomas Gross, Claudia Baierlein and Heike Krebber

EMBO reports (2011), 12, 1024 - 1031; 10.1038/embor.2011.155

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 19 August 2011

Subject Categories: Membranes & Transport | Proteins

Lac operator repeats generate a traceable fragile site in mammalian cells

Endogenous fragile sites in chromosomes can only be detected after their breakage. In this report, the authors find that insertion of lac operator repeats generate fragile sites that can be followed throughout the cell cycle and show that oncogenes promote the formation of anaphase bridges and micronuclei containing fragile sites.

Ariana Jacome and Oscar Fernandez-Capetillo

EMBO reports (2011), 12, 1032 - 1038; 10.1038/embor.2011.158

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 12 August 2011

Subject Categories: Genome Stability & Dynamics

Drosophila syndecan regulates tracheal cell migration by stabilizing Robo levels

Syndecans have crucial roles in cell adhesion, polarization and migration through their interaction with a range of extracellular ligands. The authors show in this report that Drosophila syndecan is required for the extension and fusion of the dorsal branches of the tracheal system, by reducing Slit/Robo signalling levels.

Joachim G Schulz, Helga Ceulemans, Emmanuel Caussinus, Maria F Baietti, Markus Affolter, Bassem A Hassan and Guido David

EMBO reports (2011), 12, 1039 - 1046; 10.1038/embor.2011.153

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 12 August 2011

Subject Categories: Cell & Tissue Architecture | Development

Yan, an ETS-domain transcription factor, negatively modulates the Wingless pathway in the Drosophila eye

Yan is a conserved ETS transcriptional repressor that regulates EGF receptor signalling in Drosophila. In this report, the authors show that in addition to its known function in the EGF receptor pathway, Yan also negatively regulates the Wingless pathway in the Drosophila eye, and that this regulation is required for proper retinal development.

Emily R Olson, Raluca Pancratov, Sujash S Chatterjee, Binita Changkakoty, Zeeshan Pervaiz and Ramanuj DasGupta

EMBO reports (2011), 12, 1047 - 1054; 10.1038/embor.2011.159

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 26 August 2011

Subject Categories: Cell & Tissue Architecture | Development

LGR4 and LGR5 are R-spondin receptors mediating Wnt/β-catenin and Wnt/PCP signalling

R-spondins are secreted proteins known to synergize with Wnt signalling. The authors now show that R-spondins are ligands for LGR4 and LGR5 orphan G-protein-coupled receptors. Binding of R-spondins to LGRs positively regulates both Wnt/ -catenin and Wnt/PCP signalling pathways in vivo.

Andrei Glinka, Christine Dolde, Nadine Kirsch, Ya-Lin Huang, Olga Kazanskaya, Dierk Ingelfinger, Michael Boutros, Cristina-Maria Cruciat and Christof Niehrs

EMBO reports (2011), 12, 1055 - 1061; 10.1038/embor.2011.175

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 09 September 2011

Subject Categories: Signal Transduction | Development

Sir2 histone deacetylase prevents programmed cell death caused by sustained activation of the Hog1 stress-activated protein kinase

Sustained activation of Hog1 in yeast inhibits mitochondrial respiration and leads to ROS accumulation, which causes cell death. Activation of Sir2 in response to Hog1 activation relieves the Hog1- induced oxidative stress and prevents cell death.

Alexandre Vendrell, Mar Martínez-Pastor, Alberto González-Novo, Amparo Pascual-Ahuir, David A Sinclair, Markus Proft and Francesc Posas

EMBO reports (2011), 12, 1062 - 1068; 10.1038/embor.2011.154

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 12 August 2011

Subject Categories: Differentiation & Death | Signal Transduction

CREB and ChREBP oppositely regulate SIRT1 expression in response to energy availability

The deacetylase SIRT1 is a metabolic regulator that is activated in situations of energy stress. The authors connect energy-sensing to transcriptional programmes, demonstrating that SIRT1 expression is controlled by the positive effect of CREB under energy stress, and the negative effect of ChREBP under normal conditions.

Lilia G Noriega, Jérôme N Feige, Carles Canto, Hiroyasu Yamamoto, Jiujiu Yu, Mark A Herman, Chikage Mataki, Barbara B Kahn and Johan Auwerx

EMBO reports (2011), 12, 1069 - 1076; 10.1038/embor.2011.151

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 12 August 2011

Subject Categories: Cellular Metabolism

Independent localization of MAP2, CaMKIIα and β-actin RNAs in low copy numbers

mRNA subcellular localization in neurons involves the formation of ribonucleoprotein particles (RNPs) that are transported through the cytoskeleton. The authors show that, unexpectedly, dendritic RNPs contain few molecules of mRNA and both the nature of these mRNAs and their number are tightly controlled.

Martin Mikl, Georgia Vendra and Michael A Kiebler

EMBO reports (2011), 12, 1077 - 1084; 10.1038/embor.2011.149

Abstract | Full text | PDF | Supp. info. | Review Process File

Published online: 26 August 2011

Subject Categories: Neuroscience | RNA

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